RNA–Protein interactions for RNA: ENST00000367384.6

PCMT1-203, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCMT1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-203ENST00000367384 NISCHQ9Y2I1 1504 aa45.45■■■■■ 4.87
PCMT1-203ENST00000367384 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
PCMT1-203ENST00000367384 ABCC9O60706 1549 aa39■■■■□ 3.83
PCMT1-203ENST00000367384 ZCCHC6Q5VYS8 1495 aaKnown RBP37.94■■■■□ 3.66
PCMT1-203ENST00000367384 DCAF8L2P0C7V8 631 aa37.84■■■■□ 3.65
PCMT1-203ENST00000367384 NACADO15069 1562 aa37.68■■■■□ 3.62
PCMT1-203ENST00000367384 RB1CC1Q8TDY2 1594 aa37.62■■■■□ 3.61
PCMT1-203ENST00000367384 MYO15BQ96JP2 1530 aa37.59■■■■□ 3.61
PCMT1-203ENST00000367384 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
PCMT1-203ENST00000367384 UNC13AQ9UPW8 1703 aa36.84■■■■□ 3.49
PCMT1-203ENST00000367384 SCRIBQ14160 1630 aa36.73■■■■□ 3.47
PCMT1-203ENST00000367384 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
PCMT1-203ENST00000367384 PABPN1Q86U42 306 aaKnown RBP eCLIP36.55■■■■□ 3.44
PCMT1-203ENST00000367384 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
PCMT1-203ENST00000367384 DNAJC5BQ9UF47 199 aa35.55■■■■□ 3.28
PCMT1-203ENST00000367384 EIF4G1Q04637 1599 aaKnown RBP35.52■■■■□ 3.28
PCMT1-203ENST00000367384 CECR2Q9BXF3 1484 aa35.42■■■■□ 3.26
PCMT1-203ENST00000367384 CC2D2AQ9P2K1 1620 aa35.29■■■■□ 3.24
PCMT1-203ENST00000367384 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
PCMT1-203ENST00000367384 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
PCMT1-203ENST00000367384 MROH2BQ7Z745 1585 aa35.07■■■■□ 3.2
PCMT1-203ENST00000367384 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
PCMT1-203ENST00000367384 SMARCA2P51531 1590 aa34.81■■■■□ 3.16
PCMT1-203ENST00000367384 PEG3Q9GZU2 1588 aa34.81■■■■□ 3.16
PCMT1-203ENST00000367384 NCAPD3P42695 1498 aa34.81■■■■□ 3.16
PCMT1-203ENST00000367384 RSF1Q96T23 1441 aaPredicted RBP34.8■■■■□ 3.16
PCMT1-203ENST00000367384 WIZO95785 1651 aa34.7■■■■□ 3.15
PCMT1-203ENST00000367384 HMGXB3Q12766 1538 aa34.64■■■■□ 3.14
PCMT1-203ENST00000367384 BAZ1BQ9UIG0 1483 aaKnown RBP34.59■■■■□ 3.13
PCMT1-203ENST00000367384 TOP2AP11388 1531 aaKnown RBP34.31■■■■□ 3.08
PCMT1-203ENST00000367384 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
PCMT1-203ENST00000367384 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.03
PCMT1-203ENST00000367384 NESP48681 1621 aa33.9■■■■□ 3.02
PCMT1-203ENST00000367384 CADPSQ9ULU8 1353 aa33.82■■■■□ 3
PCMT1-203ENST00000367384 LAMC3Q9Y6N6 1575 aa33.78■■■■□ 3
PCMT1-203ENST00000367384 CFTRP13569 1480 aa33.7■■■□□ 2.99
PCMT1-203ENST00000367384 PDS5BQ9NTI5 1447 aa33.55■■■□□ 2.96
PCMT1-203ENST00000367384 ERCC6Q03468 1493 aa33.52■■■□□ 2.96
PCMT1-203ENST00000367384 KIF21AQ7Z4S6 1674 aa33.47■■■□□ 2.95
PCMT1-203ENST00000367384 FANCD2Q9BXW9 1451 aa33.42■■■□□ 2.94
PCMT1-203ENST00000367384 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
PCMT1-203ENST00000367384 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
PCMT1-203ENST00000367384 THOC2Q8NI27 1593 aaKnown RBP33.25■■■□□ 2.91
PCMT1-203ENST00000367384 MRC2Q9UBG0 1479 aa33.19■■■□□ 2.9
PCMT1-203ENST00000367384 URB2Q14146 1524 aaKnown RBP33.09■■■□□ 2.89
PCMT1-203ENST00000367384 WDR62O43379 1518 aa33.08■■■□□ 2.89
PCMT1-203ENST00000367384 CHIC1Q5VXU3 224 aa33.06■■■□□ 2.88
PCMT1-203ENST00000367384 CUX2O14529 1486 aa33.02■■■□□ 2.88
PCMT1-203ENST00000367384 TOPBP1Q92547 1522 aa32.94■■■□□ 2.86
PCMT1-203ENST00000367384 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
PCMT1-203ENST00000367384 ABCC8Q09428 1581 aa32.89■■■□□ 2.86
PCMT1-203ENST00000367384 CUX1P39880 1505 aa32.85■■■□□ 2.85
PCMT1-203ENST00000367384 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
PCMT1-203ENST00000367384 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.82
PCMT1-203ENST00000367384 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
PCMT1-203ENST00000367384 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
PCMT1-203ENST00000367384 TOP2BQ02880 1626 aa32.65■■■□□ 2.82
PCMT1-203ENST00000367384 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
PCMT1-203ENST00000367384 IFT140Q96RY7 1462 aa32.6■■■□□ 2.81
PCMT1-203ENST00000367384 RAD54L2Q9Y4B4 1467 aa32.58■■■□□ 2.81
PCMT1-203ENST00000367384 SOGA1O94964 1423 aa32.56■■■□□ 2.8
PCMT1-203ENST00000367384 TARBP1Q13395 1621 aaKnown RBP32.56■■■□□ 2.8
PCMT1-203ENST00000367384 ZNF608Q9ULD9 1512 aaPredicted RBP32.49■■■□□ 2.79
PCMT1-203ENST00000367384 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
PCMT1-203ENST00000367384 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
PCMT1-203ENST00000367384 TDRD9Q8NDG6 1382 aaKnown RBP32.36■■■□□ 2.77
PCMT1-203ENST00000367384 AQRO60306 1485 aaKnown RBP eCLIP32.36■■■□□ 2.777e-7■■■□□ 17.5
PCMT1-203ENST00000367384 EIF4G3O43432 1585 aaKnown RBP32.33■■■□□ 2.77
PCMT1-203ENST00000367384 TRIM41Q8WV44 630 aa32.27■■■□□ 2.76
PCMT1-203ENST00000367384 ABCA5Q8WWZ7 1642 aa32.19■■■□□ 2.74
PCMT1-203ENST00000367384 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
PCMT1-203ENST00000367384 GRIN2BQ13224 1484 aa32.11■■■□□ 2.73
PCMT1-203ENST00000367384 PBRM1Q86U86 1689 aa32.07■■■□□ 2.72
PCMT1-203ENST00000367384 KIF27Q86VH2 1401 aa32.03■■■□□ 2.72
PCMT1-203ENST00000367384 SNAPC4Q5SXM2 1469 aa32.03■■■□□ 2.72
PCMT1-203ENST00000367384 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
PCMT1-203ENST00000367384 RUSC2Q8N2Y8 1516 aa31.97■■■□□ 2.71
PCMT1-203ENST00000367384 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
PCMT1-203ENST00000367384 IGF1RP08069 1367 aa31.92■■■□□ 2.7
PCMT1-203ENST00000367384 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.7
PCMT1-203ENST00000367384 FBLN2P98095 1184 aa31.86■■■□□ 2.69
PCMT1-203ENST00000367384 SYNJ2O15056 1496 aa31.86■■■□□ 2.69
PCMT1-203ENST00000367384 CHD1O14646 1710 aa31.85■■■□□ 2.69
PCMT1-203ENST00000367384 ADAMTS12P58397 1594 aa31.84■■■□□ 2.69
PCMT1-203ENST00000367384 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
PCMT1-203ENST00000367384 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
PCMT1-203ENST00000367384 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
PCMT1-203ENST00000367384 CUL7Q14999 1698 aa31.72■■■□□ 2.67
PCMT1-203ENST00000367384 CARMIL1Q5VZK9 1371 aa31.71■■■□□ 2.67
PCMT1-203ENST00000367384 GRIN2AQ12879 1464 aa31.71■■■□□ 2.67
PCMT1-203ENST00000367384 EEA1Q15075 1411 aa31.65■■■□□ 2.66
PCMT1-203ENST00000367384 FAM9AQ8IZU1 332 aaPredicted RBP31.64■■■□□ 2.66
PCMT1-203ENST00000367384 CSRNP3Q8WYN3 585 aa31.63■■■□□ 2.65
PCMT1-203ENST00000367384 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
PCMT1-203ENST00000367384 NUP160Q12769 1436 aa31.56■■■□□ 2.64
PCMT1-203ENST00000367384 PRXQ9BXM0 1461 aa31.56■■■□□ 2.64
PCMT1-203ENST00000367384 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
PCMT1-203ENST00000367384 RAPGEF2Q9Y4G8 1499 aa31.54■■■□□ 2.64
PCMT1-203ENST00000367384 CLASP1Q7Z460 1538 aa31.52■■■□□ 2.64
PCMT1-203ENST00000367384 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms