Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 FP475955.4-201ENST00000623131 1990 ntBASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV1A0A0A0MS02 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 AL353807.1-201ENST00000427475 662 ntBASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 ITM2C-210ENST00000620962 501 ntBASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 AC131212.4-201ENST00000623606 975 ntBASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV1A0A0A0MS02 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 TSPY21P-201ENST00000433481 731 ntBASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV1A0A0A0MS02 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRGV1A0A0A0MS02 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms