RNA–Protein interactions for RNA: ENST00000301810.11

ACAA1-201, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene ACAA1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-201ENST00000301810 NISCHQ9Y2I1 1504 aa45.04■■■■■ 4.8
ACAA1-201ENST00000301810 CCDC180Q9P1Z9 1646 aa39.73■■■■□ 3.95
ACAA1-201ENST00000301810 ABCC9O60706 1549 aa38.04■■■■□ 3.68
ACAA1-201ENST00000301810 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
ACAA1-201ENST00000301810 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
ACAA1-201ENST00000301810 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
ACAA1-201ENST00000301810 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
ACAA1-201ENST00000301810 NACADO15069 1562 aa37.09■■■■□ 3.53
ACAA1-201ENST00000301810 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
ACAA1-201ENST00000301810 SCRIBQ14160 1630 aa36.36■■■■□ 3.41
ACAA1-201ENST00000301810 UNC13AQ9UPW8 1703 aa36.26■■■■□ 3.4
ACAA1-201ENST00000301810 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
ACAA1-201ENST00000301810 BICRAQ9NZM4 1560 aa35.82■■■■□ 3.33
ACAA1-201ENST00000301810 PABPN1Q86U42 306 aaKnown RBP eCLIP35.64■■■■□ 3.31e-7■□□□□ 9.6
ACAA1-201ENST00000301810 CECR2Q9BXF3 1484 aa35.01■■■■□ 3.19
ACAA1-201ENST00000301810 BAZ1AQ9NRL2 1556 aaPredicted RBP34.87■■■■□ 3.17
ACAA1-201ENST00000301810 SMARCA4P51532 1647 aa34.83■■■■□ 3.17
ACAA1-201ENST00000301810 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
ACAA1-201ENST00000301810 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
ACAA1-201ENST00000301810 RSF1Q96T23 1441 aaPredicted RBP34.62■■■■□ 3.13
ACAA1-201ENST00000301810 WIZO95785 1651 aa34.48■■■■□ 3.11
ACAA1-201ENST00000301810 CC2D2AQ9P2K1 1620 aa34.47■■■■□ 3.11
ACAA1-201ENST00000301810 PEG3Q9GZU2 1588 aa34.42■■■■□ 3.1
ACAA1-201ENST00000301810 SUPT5HO00267 1087 aaKnown RBP34.4■■■■□ 3.1
ACAA1-201ENST00000301810 SMARCA2P51531 1590 aa34.38■■■■□ 3.09
ACAA1-201ENST00000301810 ATAD2BQ9ULI0 1458 aa34.35■■■■□ 3.09
ACAA1-201ENST00000301810 NCAPD3P42695 1498 aa34.17■■■■□ 3.06
ACAA1-201ENST00000301810 BAZ1BQ9UIG0 1483 aaKnown RBP34.15■■■■□ 3.06
ACAA1-201ENST00000301810 HMGXB3Q12766 1538 aa34.15■■■■□ 3.06
ACAA1-201ENST00000301810 TOP2AP11388 1531 aaKnown RBP34.12■■■■□ 3.05
ACAA1-201ENST00000301810 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
ACAA1-201ENST00000301810 CCDC88BA6NC98 1476 aa33.68■■■□□ 2.98
ACAA1-201ENST00000301810 CFTRP13569 1480 aa33.22■■■□□ 2.91
ACAA1-201ENST00000301810 CADPSQ9ULU8 1353 aa33.22■■■□□ 2.91
ACAA1-201ENST00000301810 PRDM2Q13029 1718 aa33.21■■■□□ 2.91
ACAA1-201ENST00000301810 LAMC3Q9Y6N6 1575 aa33.2■■■□□ 2.91
ACAA1-201ENST00000301810 NESP48681 1621 aa33.18■■■□□ 2.9
ACAA1-201ENST00000301810 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
ACAA1-201ENST00000301810 FANCD2Q9BXW9 1451 aa32.89■■■□□ 2.86
ACAA1-201ENST00000301810 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
ACAA1-201ENST00000301810 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
ACAA1-201ENST00000301810 CEP164Q9UPV0 1460 aa32.78■■■□□ 2.84
ACAA1-201ENST00000301810 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
ACAA1-201ENST00000301810 WRNQ14191 1432 aaPredicted RBP eCLIP32.63■■■□□ 2.81
ACAA1-201ENST00000301810 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
ACAA1-201ENST00000301810 CHIC1Q5VXU3 224 aa32.56■■■□□ 2.8
ACAA1-201ENST00000301810 CUX1P39880 1505 aa32.56■■■□□ 2.8
ACAA1-201ENST00000301810 MRC2Q9UBG0 1479 aa32.55■■■□□ 2.8
ACAA1-201ENST00000301810 BIVM-ERCC5R4GMW8 1640 aa32.53■■■□□ 2.8
ACAA1-201ENST00000301810 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
ACAA1-201ENST00000301810 URB2Q14146 1524 aaKnown RBP32.52■■■□□ 2.8
ACAA1-201ENST00000301810 THOC2Q8NI27 1593 aaKnown RBP32.52■■■□□ 2.8
ACAA1-201ENST00000301810 TOP2BQ02880 1626 aa32.51■■■□□ 2.8
ACAA1-201ENST00000301810 TOPBP1Q92547 1522 aa32.48■■■□□ 2.79
ACAA1-201ENST00000301810 WDR62O43379 1518 aa32.43■■■□□ 2.78
ACAA1-201ENST00000301810 TRIM41Q8WV44 630 aa32.41■■■□□ 2.78
ACAA1-201ENST00000301810 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
ACAA1-201ENST00000301810 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
ACAA1-201ENST00000301810 CUX2O14529 1486 aa32.12■■■□□ 2.73
ACAA1-201ENST00000301810 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
ACAA1-201ENST00000301810 SOGA1O94964 1423 aa32.1■■■□□ 2.73
ACAA1-201ENST00000301810 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
ACAA1-201ENST00000301810 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
ACAA1-201ENST00000301810 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
ACAA1-201ENST00000301810 ABCA10Q8WWZ4 1543 aa32.01■■■□□ 2.71
ACAA1-201ENST00000301810 RUSC2Q8N2Y8 1516 aa31.89■■■□□ 2.7
ACAA1-201ENST00000301810 ABCA5Q8WWZ7 1642 aa31.87■■■□□ 2.69
ACAA1-201ENST00000301810 KIF27Q86VH2 1401 aa31.87■■■□□ 2.69
ACAA1-201ENST00000301810 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
ACAA1-201ENST00000301810 TDRD9Q8NDG6 1382 aaKnown RBP31.82■■■□□ 2.69
ACAA1-201ENST00000301810 EIF4G3O43432 1585 aaKnown RBP31.82■■■□□ 2.69
ACAA1-201ENST00000301810 EEA1Q15075 1411 aa31.81■■■□□ 2.68
ACAA1-201ENST00000301810 FAM9AQ8IZU1 332 aaPredicted RBP31.78■■■□□ 2.68
ACAA1-201ENST00000301810 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
ACAA1-201ENST00000301810 GAPVD1Q14C86 1478 aa31.76■■■□□ 2.68
ACAA1-201ENST00000301810 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.678e-7■■■■□ 26.1
ACAA1-201ENST00000301810 ERICH3Q5RHP9 1530 aa31.65■■■□□ 2.66
ACAA1-201ENST00000301810 GRIN2BQ13224 1484 aa31.63■■■□□ 2.65
ACAA1-201ENST00000301810 CSRNP3Q8WYN3 585 aa31.61■■■□□ 2.65
ACAA1-201ENST00000301810 IGF1RP08069 1367 aa31.6■■■□□ 2.65
ACAA1-201ENST00000301810 CUL7Q14999 1698 aa31.58■■■□□ 2.65
ACAA1-201ENST00000301810 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
ACAA1-201ENST00000301810 ADAMTS12P58397 1594 aa31.51■■■□□ 2.63
ACAA1-201ENST00000301810 KIF21BO75037 1637 aa31.5■■■□□ 2.63
ACAA1-201ENST00000301810 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
ACAA1-201ENST00000301810 PRXQ9BXM0 1461 aa31.47■■■□□ 2.63
ACAA1-201ENST00000301810 CARMIL1Q5VZK9 1371 aa31.45■■■□□ 2.63
ACAA1-201ENST00000301810 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
ACAA1-201ENST00000301810 RAPGEF2Q9Y4G8 1499 aa31.38■■■□□ 2.61
ACAA1-201ENST00000301810 GOLGA3Q08378 1498 aa31.34■■■□□ 2.61
ACAA1-201ENST00000301810 SYNJ2O15056 1496 aa31.34■■■□□ 2.61
ACAA1-201ENST00000301810 EHMT2Q96KQ7 1210 aa31.34■■■□□ 2.61
ACAA1-201ENST00000301810 CHD1O14646 1710 aa31.3■■■□□ 2.6
ACAA1-201ENST00000301810 GRIN2AQ12879 1464 aa31.26■■■□□ 2.59
ACAA1-201ENST00000301810 LOC105371045A0A1W2PR82 267 aa31.25■■■□□ 2.59
ACAA1-201ENST00000301810 CHMP7Q8WUX9 453 aaPredicted RBP31.21■■■□□ 2.59
ACAA1-201ENST00000301810 FBLN2P98095 1184 aa31.19■■■□□ 2.58
ACAA1-201ENST00000301810 CTTNBP2Q8WZ74 1663 aa31.18■■■□□ 2.58
ACAA1-201ENST00000301810 UBTFP17480 764 aaKnown RBP31.14■■■□□ 2.58
ACAA1-201ENST00000301810 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms