RNA–Protein interactions for RNA: ENST00000537590.5

SLC39A1-209, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2 BASIC

Gene SLC39A1, Length 2,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-209ENST00000537590 NISCHQ9Y2I1 1504 aa43.34■■■■■ 4.53
SLC39A1-209ENST00000537590 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
SLC39A1-209ENST00000537590 ZCCHC6Q5VYS8 1495 aaKnown RBP36.4■■■■□ 3.42
SLC39A1-209ENST00000537590 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.34
SLC39A1-209ENST00000537590 ABCC9O60706 1549 aa35.89■■■■□ 3.34
SLC39A1-209ENST00000537590 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
SLC39A1-209ENST00000537590 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
SLC39A1-209ENST00000537590 MYO15BQ96JP2 1530 aa35.27■■■■□ 3.24
SLC39A1-209ENST00000537590 NACADO15069 1562 aa35.15■■■■□ 3.22
SLC39A1-209ENST00000537590 RB1CC1Q8TDY2 1594 aa34.9■■■■□ 3.18
SLC39A1-209ENST00000537590 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
SLC39A1-209ENST00000537590 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
SLC39A1-209ENST00000537590 SUPT5HO00267 1087 aaKnown RBP34.12■■■■□ 3.05
SLC39A1-209ENST00000537590 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
SLC39A1-209ENST00000537590 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
SLC39A1-209ENST00000537590 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
SLC39A1-209ENST00000537590 RSF1Q96T23 1441 aaPredicted RBP33.64■■■□□ 2.98
SLC39A1-209ENST00000537590 MROH2BQ7Z745 1585 aa33.56■■■□□ 2.96
SLC39A1-209ENST00000537590 BAZ1AQ9NRL2 1556 aaPredicted RBP33.44■■■□□ 2.94
SLC39A1-209ENST00000537590 SMARCA4P51532 1647 aa33.36■■■□□ 2.93
SLC39A1-209ENST00000537590 WIZO95785 1651 aa33.33■■■□□ 2.93
SLC39A1-209ENST00000537590 EIF4G1Q04637 1599 aaKnown RBP32.89■■■□□ 2.86
SLC39A1-209ENST00000537590 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
SLC39A1-209ENST00000537590 TOP2AP11388 1531 aaKnown RBP32.86■■■□□ 2.85
SLC39A1-209ENST00000537590 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
SLC39A1-209ENST00000537590 SMARCA2P51531 1590 aa32.72■■■□□ 2.83
SLC39A1-209ENST00000537590 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
SLC39A1-209ENST00000537590 CCDC88BA6NC98 1476 aa32.57■■■□□ 2.81
SLC39A1-209ENST00000537590 CHIC1Q5VXU3 224 aa32.57■■■□□ 2.8
SLC39A1-209ENST00000537590 NCAPD3P42695 1498 aa32.45■■■□□ 2.79
SLC39A1-209ENST00000537590 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.78
SLC39A1-209ENST00000537590 HMGXB3Q12766 1538 aa32.42■■■□□ 2.78
SLC39A1-209ENST00000537590 TRIM41Q8WV44 630 aa31.98■■■□□ 2.71
SLC39A1-209ENST00000537590 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
SLC39A1-209ENST00000537590 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
SLC39A1-209ENST00000537590 CFTRP13569 1480 aa31.76■■■□□ 2.67
SLC39A1-209ENST00000537590 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
SLC39A1-209ENST00000537590 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
SLC39A1-209ENST00000537590 PRDM2Q13029 1718 aa31.64■■■□□ 2.66
SLC39A1-209ENST00000537590 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
SLC39A1-209ENST00000537590 NESP48681 1621 aa31.53■■■□□ 2.64
SLC39A1-209ENST00000537590 FAM9AQ8IZU1 332 aaPredicted RBP31.53■■■□□ 2.64
SLC39A1-209ENST00000537590 LOC105371045A0A1W2PR82 267 aa31.42■■■□□ 2.62
SLC39A1-209ENST00000537590 TOP2BQ02880 1626 aa31.4■■■□□ 2.62
SLC39A1-209ENST00000537590 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
SLC39A1-209ENST00000537590 BIVM-ERCC5R4GMW8 1640 aa31.37■■■□□ 2.61
SLC39A1-209ENST00000537590 CUX1P39880 1505 aa31.37■■■□□ 2.61
SLC39A1-209ENST00000537590 FANCD2Q9BXW9 1451 aa31.34■■■□□ 2.61
SLC39A1-209ENST00000537590 SOGA1O94964 1423 aa31.33■■■□□ 2.61
SLC39A1-209ENST00000537590 RUSC2Q8N2Y8 1516 aa31.26■■■□□ 2.59
SLC39A1-209ENST00000537590 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.58
SLC39A1-209ENST00000537590 KIF21AQ7Z4S6 1674 aa31.14■■■□□ 2.58
SLC39A1-209ENST00000537590 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
SLC39A1-209ENST00000537590 PDS5BQ9NTI5 1447 aa31.11■■■□□ 2.57
SLC39A1-209ENST00000537590 EEA1Q15075 1411 aa31.06■■■□□ 2.56
SLC39A1-209ENST00000537590 DNMBPQ6XZF7 1577 aa31.04■■■□□ 2.56
SLC39A1-209ENST00000537590 FGD5Q6ZNL6 1462 aa31.02■■■□□ 2.56
SLC39A1-209ENST00000537590 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
SLC39A1-209ENST00000537590 CSRNP3Q8WYN3 585 aa31■■■□□ 2.55
SLC39A1-209ENST00000537590 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
SLC39A1-209ENST00000537590 POLA1P09884 1462 aaPredicted RBP30.87■■■□□ 2.53
SLC39A1-209ENST00000537590 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
SLC39A1-209ENST00000537590 CUX2O14529 1486 aa30.8■■■□□ 2.52
SLC39A1-209ENST00000537590 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
SLC39A1-209ENST00000537590 KIF21BO75037 1637 aa30.76■■■□□ 2.51
SLC39A1-209ENST00000537590 MRC2Q9UBG0 1479 aa30.75■■■□□ 2.51
SLC39A1-209ENST00000537590 GOLGA3Q08378 1498 aa30.72■■■□□ 2.51
SLC39A1-209ENST00000537590 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
SLC39A1-209ENST00000537590 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
SLC39A1-209ENST00000537590 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
SLC39A1-209ENST00000537590 WDR97A6NE52 1622 aa30.65■■■□□ 2.5
SLC39A1-209ENST00000537590 UBTFP17480 764 aaKnown RBP30.65■■■□□ 2.5
SLC39A1-209ENST00000537590 PRXQ9BXM0 1461 aa30.62■■■□□ 2.49
SLC39A1-209ENST00000537590 WDR62O43379 1518 aa30.6■■■□□ 2.49
SLC39A1-209ENST00000537590 TNIKQ9UKE5 1360 aa30.6■■■□□ 2.49
SLC39A1-209ENST00000537590 IGF1RP08069 1367 aa30.58■■■□□ 2.49
SLC39A1-209ENST00000537590 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
SLC39A1-209ENST00000537590 TARBP1Q13395 1621 aaKnown RBP30.56■■■□□ 2.48
SLC39A1-209ENST00000537590 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
SLC39A1-209ENST00000537590 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
SLC39A1-209ENST00000537590 CEP162Q5TB80 1403 aa30.51■■■□□ 2.47
SLC39A1-209ENST00000537590 ABCA5Q8WWZ7 1642 aa30.48■■■□□ 2.47
SLC39A1-209ENST00000537590 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
SLC39A1-209ENST00000537590 GAPVD1Q14C86 1478 aa30.4■■■□□ 2.46
SLC39A1-209ENST00000537590 IFT140Q96RY7 1462 aa30.35■■■□□ 2.45
SLC39A1-209ENST00000537590 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.452e-6■■■■■ 26.9
SLC39A1-209ENST00000537590 CUL7Q14999 1698 aa30.32■■■□□ 2.44
SLC39A1-209ENST00000537590 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
SLC39A1-209ENST00000537590 RANGAP1P46060 587 aaPredicted RBP30.31■■■□□ 2.44
SLC39A1-209ENST00000537590 PBRM1Q86U86 1689 aa30.29■■■□□ 2.44
SLC39A1-209ENST00000537590 CLIP1P30622 1438 aa30.26■■■□□ 2.43
SLC39A1-209ENST00000537590 EIF4G3O43432 1585 aaKnown RBP30.19■■■□□ 2.42
SLC39A1-209ENST00000537590 GRIN2BQ13224 1484 aa30.14■■■□□ 2.41
SLC39A1-209ENST00000537590 ADAMTS12P58397 1594 aa30.09■■■□□ 2.41
SLC39A1-209ENST00000537590 CTTNBP2Q8WZ74 1663 aa30.06■■■□□ 2.4
SLC39A1-209ENST00000537590 PPARGC1BQ86YN6 1023 aaKnown RBP30.04■■■□□ 2.4
SLC39A1-209ENST00000537590 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
SLC39A1-209ENST00000537590 SNAPC4Q5SXM2 1469 aa30.02■■■□□ 2.4
SLC39A1-209ENST00000537590 ARAP1Q96P48 1450 aa30.01■■■□□ 2.39
SLC39A1-209ENST00000537590 ARHGAP35Q9NRY4 1499 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms