RNA–Protein interactions for RNA: ENST00000355285.9

APCDD1-201, Transcript of APC down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APCDD1, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APCDD1-201ENST00000355285 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
APCDD1-201ENST00000355285 DCAF8L2P0C7V8 631 aa32.9■■■□□ 2.86
APCDD1-201ENST00000355285 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
APCDD1-201ENST00000355285 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
APCDD1-201ENST00000355285 EHMT2Q96KQ7 1210 aa30.29■■■□□ 2.44
APCDD1-201ENST00000355285 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
APCDD1-201ENST00000355285 ABCC9O60706 1549 aa29.62■■■□□ 2.33
APCDD1-201ENST00000355285 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
APCDD1-201ENST00000355285 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
APCDD1-201ENST00000355285 PCGF6Q9BYE7 350 aa29.39■■■□□ 2.29
APCDD1-201ENST00000355285 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
APCDD1-201ENST00000355285 TRIM41Q8WV44 630 aa29.31■■■□□ 2.28
APCDD1-201ENST00000355285 CCDC180Q9P1Z9 1646 aa29.25■■■□□ 2.27
APCDD1-201ENST00000355285 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
APCDD1-201ENST00000355285 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
APCDD1-201ENST00000355285 PPARGC1BQ86YN6 1023 aaKnown RBP28.91■■■□□ 2.22
APCDD1-201ENST00000355285 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
APCDD1-201ENST00000355285 RANGAP1P46060 587 aaPredicted RBP28.79■■■□□ 2.2
APCDD1-201ENST00000355285 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
APCDD1-201ENST00000355285 UBTFP17480 764 aaKnown RBP28.44■■■□□ 2.14
APCDD1-201ENST00000355285 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
APCDD1-201ENST00000355285 HRCP23327 699 aa28.18■■■□□ 2.1
APCDD1-201ENST00000355285 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
APCDD1-201ENST00000355285 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
APCDD1-201ENST00000355285 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
APCDD1-201ENST00000355285 APLP2Q06481 763 aa28.07■■■□□ 2.08
APCDD1-201ENST00000355285 CCER1Q8TC90 406 aaPredicted RBP27.96■■■□□ 2.07
APCDD1-201ENST00000355285 NACADO15069 1562 aa27.83■■■□□ 2.05
APCDD1-201ENST00000355285 ATP1B4Q9UN42 357 aaPredicted RBP27.81■■■□□ 2.04
APCDD1-201ENST00000355285 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
APCDD1-201ENST00000355285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.74■■■□□ 2.03
APCDD1-201ENST00000355285 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.03
APCDD1-201ENST00000355285 HNRNPUL2Q1KMD3 747 aaKnown RBP27.62■■■□□ 2.01
APCDD1-201ENST00000355285 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
APCDD1-201ENST00000355285 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
APCDD1-201ENST00000355285 ITGAEP38570 1179 aa27.49■■□□□ 1.99
APCDD1-201ENST00000355285 WIZO95785 1651 aa27.41■■□□□ 1.98
APCDD1-201ENST00000355285 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
APCDD1-201ENST00000355285 ABCC8Q09428 1581 aa27.2■■□□□ 1.94
APCDD1-201ENST00000355285 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
APCDD1-201ENST00000355285 P3H3Q8IVL6 736 aa27.14■■□□□ 1.93
APCDD1-201ENST00000355285 SOGA1O94964 1423 aa27.12■■□□□ 1.93
APCDD1-201ENST00000355285 YTHDC1Q96MU7 727 aaKnown RBP27.09■■□□□ 1.93
APCDD1-201ENST00000355285 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
APCDD1-201ENST00000355285 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
APCDD1-201ENST00000355285 CEP162Q5TB80 1403 aa26.89■■□□□ 1.9
APCDD1-201ENST00000355285 ARID3CA6NKF2 412 aa26.83■■□□□ 1.89
APCDD1-201ENST00000355285 SMARCA4P51532 1647 aa26.83■■□□□ 1.88
APCDD1-201ENST00000355285 FAM50AQ14320 339 aaKnown RBP26.82■■□□□ 1.88
APCDD1-201ENST00000355285 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
APCDD1-201ENST00000355285 TOP2AP11388 1531 aaKnown RBP26.78■■□□□ 1.88
APCDD1-201ENST00000355285 DIEXFQ68CQ4 756 aaKnown RBP26.74■■□□□ 1.87
APCDD1-201ENST00000355285 CLIP1P30622 1438 aa26.71■■□□□ 1.87
APCDD1-201ENST00000355285 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
APCDD1-201ENST00000355285 TNIKQ9UKE5 1360 aa26.62■■□□□ 1.85
APCDD1-201ENST00000355285 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
APCDD1-201ENST00000355285 FBLN2P98095 1184 aa26.6■■□□□ 1.85
APCDD1-201ENST00000355285 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
APCDD1-201ENST00000355285 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
APCDD1-201ENST00000355285 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
APCDD1-201ENST00000355285 EEA1Q15075 1411 aa26.51■■□□□ 1.83
APCDD1-201ENST00000355285 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
APCDD1-201ENST00000355285 CNGB1Q14028 1251 aaPredicted RBP26.34■■□□□ 1.81
APCDD1-201ENST00000355285 ZNF316A6NFI3 1004 aaPredicted RBP26.34■■□□□ 1.81
APCDD1-201ENST00000355285 KIF27Q86VH2 1401 aa26.34■■□□□ 1.81
APCDD1-201ENST00000355285 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.81
APCDD1-201ENST00000355285 RAPGEF2Q9Y4G8 1499 aa26.32■■□□□ 1.8
APCDD1-201ENST00000355285 KANK4Q5T7N3 995 aaPredicted RBP26.31■■□□□ 1.8
APCDD1-201ENST00000355285 CUX2O14529 1486 aa26.27■■□□□ 1.8
APCDD1-201ENST00000355285 TRIM52Q96A61 297 aa26.23■■□□□ 1.79
APCDD1-201ENST00000355285 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
APCDD1-201ENST00000355285 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
APCDD1-201ENST00000355285 CHIC2Q9UKJ5 165 aa26.15■■□□□ 1.78
APCDD1-201ENST00000355285 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
APCDD1-201ENST00000355285 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
APCDD1-201ENST00000355285 HIRIP3Q9BW71 556 aaPredicted RBP26.09■■□□□ 1.77
APCDD1-201ENST00000355285 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
APCDD1-201ENST00000355285 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
APCDD1-201ENST00000355285 VPS8Q8N3P4 1428 aa26.08■■□□□ 1.77
APCDD1-201ENST00000355285 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
APCDD1-201ENST00000355285 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.76
APCDD1-201ENST00000355285 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
APCDD1-201ENST00000355285 ZNF777Q9ULD5 760 aaPredicted RBP26.05■■□□□ 1.76
APCDD1-201ENST00000355285 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
APCDD1-201ENST00000355285 MIER1Q8N108 512 aa25.99■■□□□ 1.75
APCDD1-201ENST00000355285 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
APCDD1-201ENST00000355285 MTUS2Q5JR59 1369 aa25.94■■□□□ 1.74
APCDD1-201ENST00000355285 ZNF326Q5BKZ1 582 aaKnown RBP25.93■■□□□ 1.74
APCDD1-201ENST00000355285 MYT1LQ9UL68 1186 aa25.92■■□□□ 1.74
APCDD1-201ENST00000355285 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
APCDD1-201ENST00000355285 RRP7BPQ9NSQ0 103 aa25.89■■□□□ 1.74
APCDD1-201ENST00000355285 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.73
APCDD1-201ENST00000355285 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
APCDD1-201ENST00000355285 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
APCDD1-201ENST00000355285 DDX10Q13206 875 aaKnown RBP25.82■■□□□ 1.72
APCDD1-201ENST00000355285 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
APCDD1-201ENST00000355285 NESP48681 1621 aa25.82■■□□□ 1.72
APCDD1-201ENST00000355285 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
APCDD1-201ENST00000355285 IGF1RP08069 1367 aa25.8■■□□□ 1.72
APCDD1-201ENST00000355285 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms