Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB9Q9Y5E1 AP001148.1-201ENST00000624124 2359 ntBASIC5.47□□□□□ -1.53
PCDHB9Q9Y5E1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PCDHB9Q9Y5E1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB9Q9Y5E1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB9Q9Y5E1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.46□□□□□ -1.53
PCDHB9Q9Y5E1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB9Q9Y5E1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.16-201ENST00000362421 102 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 U3.6-201ENST00000363622 211 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 SNORD14B-201ENST00000364533 90 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 RNU6-378P-201ENST00000384324 107 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 RNY3P4-201ENST00000384428 101 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.581-201ENST00000391017 97 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.793-201ENST00000411222 111 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 VTI1BP4-201ENST00000427516 527 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 RPL23AP22-201ENST00000437556 453 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 ISCUP1-201ENST00000454451 448 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.644-201ENST00000459006 113 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AC092754.1-201ENST00000472975 479 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 SNRPCP2-201ENST00000504370 475 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.674-201ENST00000516362 113 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 RNU6-612P-201ENST00000516909 102 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 RNU6-255P-201ENST00000516957 105 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AP004607.2-201ENST00000533949 322 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AP002770.2-201ENST00000543613 532 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AC126177.5-201ENST00000549599 178 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AC103996.1-201ENST00000555468 102 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AC006206.1-201ENST00000544842 3387 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.54
PCDHB9Q9Y5E1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AL391684.1-202ENST00000641293 1636 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.83-201ENST00000363005 113 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 RNU1-43P-201ENST00000365052 165 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.358-201ENST00000365491 99 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 SNORA56-201ENST00000383966 129 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 SNORA12.2-201ENST00000391040 156 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 MIR548I2-201ENST00000408348 149 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 RPL12P18-201ENST00000437175 325 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 RN7SL197P-201ENST00000466981 299 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.703-201ENST00000516846 111 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 HMGB1P40-201ENST00000525121 540 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC104581.2-201ENST00000572227 430 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 MIR3133-201ENST00000583157 78 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC006116.3-201ENST00000592968 361 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 RNF138P2-201ENST00000603490 592 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 uc_338.7-201ENST00000621834 124 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC073869.10-201ENST00000642016 354 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 AC009643.2-201ENST00000603543 1448 ntBASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB9Q9Y5E1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 RNU6-356P-201ENST00000384140 107 ntBASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.541-201ENST00000384640 113 ntBASIC5.44□□□□□ -1.54
PCDHB9Q9Y5E1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms