RNA–Protein interactions for RNA: ENST00000533949.1

AP004607.2-201, humanhuman

BASIC

Gene AP004607.2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004607.2-201ENST00000533949 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
AP004607.2-201ENST00000533949 ABCC9O60706 1549 aa12.35□□□□□ -0.43
AP004607.2-201ENST00000533949 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
AP004607.2-201ENST00000533949 DNAJC5Q9H3Z4 198 aa11.68□□□□□ -0.54
AP004607.2-201ENST00000533949 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
AP004607.2-201ENST00000533949 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
AP004607.2-201ENST00000533949 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
AP004607.2-201ENST00000533949 UNC13AQ9UPW8 1703 aa11.16□□□□□ -0.62
AP004607.2-201ENST00000533949 CECR2Q9BXF3 1484 aa11.16□□□□□ -0.62
AP004607.2-201ENST00000533949 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
AP004607.2-201ENST00000533949 NACADO15069 1562 aa11.11□□□□□ -0.63
AP004607.2-201ENST00000533949 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
AP004607.2-201ENST00000533949 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
AP004607.2-201ENST00000533949 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
AP004607.2-201ENST00000533949 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
AP004607.2-201ENST00000533949 CUX2O14529 1486 aa10.85□□□□□ -0.67
AP004607.2-201ENST00000533949 SHROOM4Q9ULL8 1493 aa10.79□□□□□ -0.68
AP004607.2-201ENST00000533949 MYO15BQ96JP2 1530 aa10.7□□□□□ -0.7
AP004607.2-201ENST00000533949 ERCC6Q03468 1493 aa10.64□□□□□ -0.71
AP004607.2-201ENST00000533949 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
AP004607.2-201ENST00000533949 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
AP004607.2-201ENST00000533949 NESP48681 1621 aa10.44□□□□□ -0.74
AP004607.2-201ENST00000533949 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
AP004607.2-201ENST00000533949 DCAF1Q9Y4B6 1507 aa10.41□□□□□ -0.74
AP004607.2-201ENST00000533949 AEBP2Q6ZN18 517 aaPredicted RBP10.35□□□□□ -0.75
AP004607.2-201ENST00000533949 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
AP004607.2-201ENST00000533949 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
AP004607.2-201ENST00000533949 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
AP004607.2-201ENST00000533949 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
AP004607.2-201ENST00000533949 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
AP004607.2-201ENST00000533949 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
AP004607.2-201ENST00000533949 KIF21AQ7Z4S6 1674 aa10.23□□□□□ -0.77
AP004607.2-201ENST00000533949 OSCARQ8IYS5 282 aa10.23□□□□□ -0.77
AP004607.2-201ENST00000533949 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
AP004607.2-201ENST00000533949 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
AP004607.2-201ENST00000533949 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
AP004607.2-201ENST00000533949 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
AP004607.2-201ENST00000533949 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
AP004607.2-201ENST00000533949 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
AP004607.2-201ENST00000533949 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
AP004607.2-201ENST00000533949 WDR62O43379 1518 aa10.1□□□□□ -0.79
AP004607.2-201ENST00000533949 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
AP004607.2-201ENST00000533949 CYB5RLQ6IPT4 315 aa10.09□□□□□ -0.79
AP004607.2-201ENST00000533949 BAZ1BQ9UIG0 1483 aaKnown RBP10.02□□□□□ -0.81
AP004607.2-201ENST00000533949 ARAP1Q96P48 1450 aa10.01□□□□□ -0.81
AP004607.2-201ENST00000533949 SMARCA4P51532 1647 aa9.99□□□□□ -0.81
AP004607.2-201ENST00000533949 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
AP004607.2-201ENST00000533949 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
AP004607.2-201ENST00000533949 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
AP004607.2-201ENST00000533949 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
AP004607.2-201ENST00000533949 URB2Q14146 1524 aaKnown RBP9.86□□□□□ -0.83
AP004607.2-201ENST00000533949 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
AP004607.2-201ENST00000533949 MROH2BQ7Z745 1585 aa9.81□□□□□ -0.84
AP004607.2-201ENST00000533949 SUPT5HO00267 1087 aaKnown RBP9.8□□□□□ -0.84
AP004607.2-201ENST00000533949 RSF1Q96T23 1441 aaPredicted RBP9.79□□□□□ -0.84
AP004607.2-201ENST00000533949 CHD1O14646 1710 aa9.79□□□□□ -0.84
AP004607.2-201ENST00000533949 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
AP004607.2-201ENST00000533949 EIF4G3O43432 1585 aaKnown RBP9.72□□□□□ -0.85
AP004607.2-201ENST00000533949 IFT140Q96RY7 1462 aa9.72□□□□□ -0.85
AP004607.2-201ENST00000533949 CFTRP13569 1480 aa9.7□□□□□ -0.86
AP004607.2-201ENST00000533949 WIZO95785 1651 aa9.7□□□□□ -0.86
AP004607.2-201ENST00000533949 FBLN2P98095 1184 aa9.69□□□□□ -0.86
AP004607.2-201ENST00000533949 CLASP1Q7Z460 1538 aa9.66□□□□□ -0.86
AP004607.2-201ENST00000533949 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.86
AP004607.2-201ENST00000533949 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
AP004607.2-201ENST00000533949 TOPBP1Q92547 1522 aa9.6□□□□□ -0.87
AP004607.2-201ENST00000533949 KIF13AQ9H1H9 1805 aa9.58□□□□□ -0.88
AP004607.2-201ENST00000533949 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
AP004607.2-201ENST00000533949 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
AP004607.2-201ENST00000533949 ERCC6L2Q5T890 1561 aa9.56□□□□□ -0.88
AP004607.2-201ENST00000533949 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
AP004607.2-201ENST00000533949 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
AP004607.2-201ENST00000533949 LMTK3Q96Q04 1460 aa9.55□□□□□ -0.88
AP004607.2-201ENST00000533949 SYNJ1O43426 1573 aa9.53□□□□□ -0.88
AP004607.2-201ENST00000533949 SNAPC4Q5SXM2 1469 aa9.53□□□□□ -0.88
AP004607.2-201ENST00000533949 ILDR2Q71H61 639 aa9.51□□□□□ -0.89
AP004607.2-201ENST00000533949 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
AP004607.2-201ENST00000533949 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
AP004607.2-201ENST00000533949 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
AP004607.2-201ENST00000533949 SOCS7O14512 581 aa9.48□□□□□ -0.89
AP004607.2-201ENST00000533949 DNMBPQ6XZF7 1577 aa9.47□□□□□ -0.89
AP004607.2-201ENST00000533949 CHMP7Q8WUX9 453 aaPredicted RBP9.47□□□□□ -0.89
AP004607.2-201ENST00000533949 ADGRL1O94910 1474 aa9.47□□□□□ -0.89
AP004607.2-201ENST00000533949 RAD54L2Q9Y4B4 1467 aa9.47□□□□□ -0.89
AP004607.2-201ENST00000533949 POLA1P09884 1462 aaPredicted RBP9.46□□□□□ -0.9
AP004607.2-201ENST00000533949 KDM6BO15054 1643 aa9.45□□□□□ -0.9
AP004607.2-201ENST00000533949 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
AP004607.2-201ENST00000533949 FAM69CQ0P6D2 419 aa9.43□□□□□ -0.9
AP004607.2-201ENST00000533949 ABCC8Q09428 1581 aa9.42□□□□□ -0.9
AP004607.2-201ENST00000533949 MAGI1Q96QZ7 1491 aaPredicted RBP9.42□□□□□ -0.9
AP004607.2-201ENST00000533949 ABCC10Q5T3U5 1492 aa9.41□□□□□ -0.9
AP004607.2-201ENST00000533949 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
AP004607.2-201ENST00000533949 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
AP004607.2-201ENST00000533949 SOGA1O94964 1423 aa9.37□□□□□ -0.91
AP004607.2-201ENST00000533949 GRIN2BQ13224 1484 aa9.36□□□□□ -0.91
AP004607.2-201ENST00000533949 DISP3Q9P2K9 1392 aa9.36□□□□□ -0.91
AP004607.2-201ENST00000533949 TSPOAP1O95153 1857 aa9.35□□□□□ -0.91
AP004607.2-201ENST00000533949 WDR97A6NE52 1622 aa9.32□□□□□ -0.92
AP004607.2-201ENST00000533949 MAPKBP1O60336 1514 aa9.31□□□□□ -0.92
AP004607.2-201ENST00000533949 FGD5Q6ZNL6 1462 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 344 ms