RNA–Protein interactions for RNA: ENST00000636573.1

GABRA1-215, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-215ENST00000636573 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.46
GABRA1-215ENST00000636573 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
GABRA1-215ENST00000636573 NISCHQ9Y2I1 1504 aa10.82□□□□□ -0.68
GABRA1-215ENST00000636573 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
GABRA1-215ENST00000636573 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
GABRA1-215ENST00000636573 PHF23Q9BUL5 403 aaPredicted RBP10.45□□□□□ -0.74
GABRA1-215ENST00000636573 FOXD1Q16676 465 aa9.98□□□□□ -0.81
GABRA1-215ENST00000636573 MSH5O43196 834 aa9.84□□□□□ -0.83
GABRA1-215ENST00000636573 HRCP23327 699 aa9.72□□□□□ -0.85
GABRA1-215ENST00000636573 PLPPR3Q6T4P5 718 aa9.59□□□□□ -0.87
GABRA1-215ENST00000636573 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
GABRA1-215ENST00000636573 EHMT2Q96KQ7 1210 aa9.5□□□□□ -0.89
GABRA1-215ENST00000636573 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
GABRA1-215ENST00000636573 SHROOM4Q9ULL8 1493 aa9.46□□□□□ -0.89
GABRA1-215ENST00000636573 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
GABRA1-215ENST00000636573 PPARGC1BQ86YN6 1023 aaKnown RBP9.4□□□□□ -0.9
GABRA1-215ENST00000636573 MYO15BQ96JP2 1530 aa9.39□□□□□ -0.91
GABRA1-215ENST00000636573 DCAF1Q9Y4B6 1507 aa9.33□□□□□ -0.92
GABRA1-215ENST00000636573 KCNA4P22459 653 aa9.25□□□□□ -0.93
GABRA1-215ENST00000636573 ZEB1P37275 1124 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-215ENST00000636573 TRIM26Q12899 539 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-215ENST00000636573 MYT1Q01538 1121 aa9.22□□□□□ -0.93
GABRA1-215ENST00000636573 PIAS4Q8N2W9 510 aaPredicted RBP9.22□□□□□ -0.93
GABRA1-215ENST00000636573 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
GABRA1-215ENST00000636573 ZCCHC6Q5VYS8 1495 aaKnown RBP9.21□□□□□ -0.94
GABRA1-215ENST00000636573 ADRA2BP18089 450 aa9.16□□□□□ -0.94
GABRA1-215ENST00000636573 SCAF1Q9H7N4 1312 aaKnown RBP9.15□□□□□ -0.94
GABRA1-215ENST00000636573 LOC105371045A0A1W2PR82 267 aa9.11□□□□□ -0.95
GABRA1-215ENST00000636573 CSRNP3Q8WYN3 585 aa9.02□□□□□ -0.97
GABRA1-215ENST00000636573 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
GABRA1-215ENST00000636573 CENPBP07199 599 aaPredicted RBP8.92□□□□□ -0.98
GABRA1-215ENST00000636573 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
GABRA1-215ENST00000636573 PPP6R1Q9UPN7 881 aa8.9□□□□□ -0.98
GABRA1-215ENST00000636573 DCAF8L2P0C7V8 631 aa8.89□□□□□ -0.99
GABRA1-215ENST00000636573 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
GABRA1-215ENST00000636573 SLC4A1APQ9BWU0 796 aaKnown RBP8.85□□□□□ -0.99
GABRA1-215ENST00000636573 SLC24A1O60721 1099 aa8.83□□□□□ -1
GABRA1-215ENST00000636573 CACNB1Q02641 598 aaPredicted RBP8.83□□□□□ -1
GABRA1-215ENST00000636573 TRIM41Q8WV44 630 aa8.82□□□□□ -1
GABRA1-215ENST00000636573 DIEXFQ68CQ4 756 aaKnown RBP8.81□□□□□ -1
GABRA1-215ENST00000636573 CCER1Q8TC90 406 aaPredicted RBP8.79□□□□□ -1
GABRA1-215ENST00000636573 ABCC9O60706 1549 aa8.76□□□□□ -1.01
GABRA1-215ENST00000636573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.74□□□□□ -1.01
GABRA1-215ENST00000636573 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
GABRA1-215ENST00000636573 RSF1Q96T23 1441 aaPredicted RBP8.7□□□□□ -1.02
GABRA1-215ENST00000636573 RB1CC1Q8TDY2 1594 aa8.68□□□□□ -1.02
GABRA1-215ENST00000636573 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
GABRA1-215ENST00000636573 TTBK1Q5TCY1 1321 aaPredicted RBP8.66□□□□□ -1.02
GABRA1-215ENST00000636573 RTN4Q9NQC3 1192 aaKnown RBP8.63□□□□□ -1.03
GABRA1-215ENST00000636573 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
GABRA1-215ENST00000636573 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
GABRA1-215ENST00000636573 CLSPNQ9HAW4 1339 aa8.59□□□□□ -1.04
GABRA1-215ENST00000636573 WRNQ14191 1432 aaPredicted RBP eCLIP8.58□□□□□ -1.04
GABRA1-215ENST00000636573 ZBTB22O15209 634 aa8.57□□□□□ -1.04
GABRA1-215ENST00000636573 MIER1Q8N108 512 aa8.55□□□□□ -1.04
GABRA1-215ENST00000636573 SCRIBQ14160 1630 aa8.52□□□□□ -1.05
GABRA1-215ENST00000636573 ANP32EQ9BTT0 268 aa8.5□□□□□ -1.05
GABRA1-215ENST00000636573 NPM3O75607 178 aaKnown RBP8.47□□□□□ -1.05
GABRA1-215ENST00000636573 CEP162Q5TB80 1403 aa8.47□□□□□ -1.05
GABRA1-215ENST00000636573 TNIKQ9UKE5 1360 aa8.46□□□□□ -1.06
GABRA1-215ENST00000636573 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.06
GABRA1-215ENST00000636573 AMER1Q5JTC6 1135 aaPredicted RBP8.45□□□□□ -1.06
GABRA1-215ENST00000636573 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
GABRA1-215ENST00000636573 NCBP3Q53F19 620 aaKnown RBP8.44□□□□□ -1.06
GABRA1-215ENST00000636573 TSHZ2Q9NRE2 1034 aa8.42□□□□□ -1.06
GABRA1-215ENST00000636573 EIF4G1Q04637 1599 aaKnown RBP8.42□□□□□ -1.06
GABRA1-215ENST00000636573 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
GABRA1-215ENST00000636573 EEA1Q15075 1411 aa8.4□□□□□ -1.06
GABRA1-215ENST00000636573 WIZO95785 1651 aa8.4□□□□□ -1.07
GABRA1-215ENST00000636573 CECR2Q9BXF3 1484 aa8.4□□□□□ -1.07
GABRA1-215ENST00000636573 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
GABRA1-215ENST00000636573 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
GABRA1-215ENST00000636573 HNRNPUL2Q1KMD3 747 aaKnown RBP8.37□□□□□ -1.07
GABRA1-215ENST00000636573 UBTFP17480 764 aaKnown RBP8.36□□□□□ -1.07
GABRA1-215ENST00000636573 CCDC88BA6NC98 1476 aa8.35□□□□□ -1.07
GABRA1-215ENST00000636573 GOLGA3Q08378 1498 aa8.34□□□□□ -1.07
GABRA1-215ENST00000636573 ABCC8Q09428 1581 aa8.33□□□□□ -1.08
GABRA1-215ENST00000636573 SOGA1O94964 1423 aa8.32□□□□□ -1.08
GABRA1-215ENST00000636573 APLP2Q06481 763 aa8.29□□□□□ -1.08
GABRA1-215ENST00000636573 NACADO15069 1562 aa8.29□□□□□ -1.08
GABRA1-215ENST00000636573 TOP2AP11388 1531 aaKnown RBP8.28□□□□□ -1.08
GABRA1-215ENST00000636573 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
GABRA1-215ENST00000636573 CEP164Q9UPV0 1460 aa8.25□□□□□ -1.09
GABRA1-215ENST00000636573 RUSC2Q8N2Y8 1516 aa8.25□□□□□ -1.09
GABRA1-215ENST00000636573 POTEHQ6S545 545 aa8.25□□□□□ -1.09
GABRA1-215ENST00000636573 CLIP1P30622 1438 aa8.25□□□□□ -1.09
GABRA1-215ENST00000636573 DHX57Q6P158 1386 aaKnown RBP8.25□□□□□ -1.09
GABRA1-215ENST00000636573 KIF21BO75037 1637 aa8.24□□□□□ -1.09
GABRA1-215ENST00000636573 SMARCA2P51531 1590 aa8.23□□□□□ -1.09
GABRA1-215ENST00000636573 FKBP8Q14318 412 aa8.23□□□□□ -1.09
GABRA1-215ENST00000636573 RBM19Q9Y4C8 960 aaKnown RBP8.23□□□□□ -1.09
GABRA1-215ENST00000636573 NEFLP07196 543 aa8.23□□□□□ -1.09
GABRA1-215ENST00000636573 BCANQ96GW7 911 aa8.22□□□□□ -1.09
GABRA1-215ENST00000636573 BAZ1BQ9UIG0 1483 aaKnown RBP8.21□□□□□ -1.1
GABRA1-215ENST00000636573 FOXD4L1Q9NU39 408 aa8.2□□□□□ -1.1
GABRA1-215ENST00000636573 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
GABRA1-215ENST00000636573 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
GABRA1-215ENST00000636573 SMARCA4P51532 1647 aa8.17□□□□□ -1.1
GABRA1-215ENST00000636573 KCNH8Q96L42 1107 aa8.15□□□□□ -1.1
GABRA1-215ENST00000636573 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms