RNA–Protein interactions for RNA: ENST00000516909.1

RNU6-612P-201, Transcript of RNA, U6 small nuclear 612, pseudogene, humanhuman

BASIC

Gene RNU6-612P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-612P-201ENST00000516909 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
RNU6-612P-201ENST00000516909 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
RNU6-612P-201ENST00000516909 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
RNU6-612P-201ENST00000516909 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
RNU6-612P-201ENST00000516909 FOXD1Q16676 465 aa12.38□□□□□ -0.43
RNU6-612P-201ENST00000516909 PPP6R1Q9UPN7 881 aa11.62□□□□□ -0.55
RNU6-612P-201ENST00000516909 PLPPR3Q6T4P5 718 aa11.55□□□□□ -0.56
RNU6-612P-201ENST00000516909 ADRA2BP18089 450 aa11.51□□□□□ -0.57
RNU6-612P-201ENST00000516909 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
RNU6-612P-201ENST00000516909 POTEDQ86YR6 584 aa11.42□□□□□ -0.58
RNU6-612P-201ENST00000516909 MSH5O43196 834 aa11.4□□□□□ -0.58
RNU6-612P-201ENST00000516909 MAPK8IP2Q13387 824 aaPredicted RBP10.65□□□□□ -0.7
RNU6-612P-201ENST00000516909 DMRT2Q9Y5R5 561 aa10.44□□□□□ -0.74
RNU6-612P-201ENST00000516909 SCAF1Q9H7N4 1312 aaKnown RBP10.25□□□□□ -0.77
RNU6-612P-201ENST00000516909 PPP4R3CPQ6ZMV5 832 aa10.2□□□□□ -0.78
RNU6-612P-201ENST00000516909 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
RNU6-612P-201ENST00000516909 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
RNU6-612P-201ENST00000516909 DCAF8L1A6NGE4 600 aa9.94□□□□□ -0.82
RNU6-612P-201ENST00000516909 RNF216Q9NWF9 866 aaPredicted RBP9.9□□□□□ -0.82
RNU6-612P-201ENST00000516909 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
RNU6-612P-201ENST00000516909 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
RNU6-612P-201ENST00000516909 KCNA4P22459 653 aa9.81□□□□□ -0.84
RNU6-612P-201ENST00000516909 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
RNU6-612P-201ENST00000516909 NPM3O75607 178 aaKnown RBP9.69□□□□□ -0.86
RNU6-612P-201ENST00000516909 C1QBPQ07021 282 aaKnown RBP9.6□□□□□ -0.87
RNU6-612P-201ENST00000516909 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
RNU6-612P-201ENST00000516909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.47□□□□□ -0.89
RNU6-612P-201ENST00000516909 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
RNU6-612P-201ENST00000516909 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
RNU6-612P-201ENST00000516909 SLC4A2P04920 1241 aa9.34□□□□□ -0.91
RNU6-612P-201ENST00000516909 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
RNU6-612P-201ENST00000516909 DSG3P32926 999 aa9.22□□□□□ -0.93
RNU6-612P-201ENST00000516909 CAPN15O75808 1086 aa9.16□□□□□ -0.94
RNU6-612P-201ENST00000516909 EHMT2Q96KQ7 1210 aa9.09□□□□□ -0.95
RNU6-612P-201ENST00000516909 ABCB7O75027 752 aa9.04□□□□□ -0.96
RNU6-612P-201ENST00000516909 TRHP20396 242 aaPredicted RBP9.03□□□□□ -0.96
RNU6-612P-201ENST00000516909 FOXD4L1Q9NU39 408 aa9.03□□□□□ -0.96
RNU6-612P-201ENST00000516909 ZBTB22O15209 634 aa9.02□□□□□ -0.97
RNU6-612P-201ENST00000516909 CSRNP3Q8WYN3 585 aa8.98□□□□□ -0.97
RNU6-612P-201ENST00000516909 ZNF219Q9P2Y4 722 aaPredicted RBP8.91□□□□□ -0.98
RNU6-612P-201ENST00000516909 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
RNU6-612P-201ENST00000516909 POTEHQ6S545 545 aa8.89□□□□□ -0.99
RNU6-612P-201ENST00000516909 ATF5Q9Y2D1 282 aaPredicted RBP8.88□□□□□ -0.99
RNU6-612P-201ENST00000516909 SAMD1Q6SPF0 538 aaPredicted RBP8.86□□□□□ -0.99
RNU6-612P-201ENST00000516909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.85□□□□□ -0.99
RNU6-612P-201ENST00000516909 HNRNPUL2Q1KMD3 747 aaKnown RBP8.85□□□□□ -0.99
RNU6-612P-201ENST00000516909 APLP2Q06481 763 aa8.8□□□□□ -1
RNU6-612P-201ENST00000516909 POLA2Q14181 598 aa8.8□□□□□ -1
RNU6-612P-201ENST00000516909 ATXN8OSP0DMR3 200 aa8.73□□□□□ -1.01
RNU6-612P-201ENST00000516909 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
RNU6-612P-201ENST00000516909 CHRDL2Q6WN34 429 aa8.57□□□□□ -1.04
RNU6-612P-201ENST00000516909 OSCARQ8IYS5 282 aa8.55□□□□□ -1.04
RNU6-612P-201ENST00000516909 REM2Q8IYK8 340 aaPredicted RBP8.47□□□□□ -1.05
RNU6-612P-201ENST00000516909 AKT1S1Q96B36 256 aa8.47□□□□□ -1.05
RNU6-612P-201ENST00000516909 MKRN4PQ13434 485 aaPredicted RBP8.43□□□□□ -1.06
RNU6-612P-201ENST00000516909 PIP4P2Q8N4L2 257 aa8.41□□□□□ -1.06
RNU6-612P-201ENST00000516909 ZBTB12Q9Y330 459 aaPredicted RBP8.41□□□□□ -1.06
RNU6-612P-201ENST00000516909 PITPNM1O00562 1244 aa8.4□□□□□ -1.06
RNU6-612P-201ENST00000516909 FXR2P51116 673 aaKnown RBP eCLIP8.33□□□□□ -1.08
RNU6-612P-201ENST00000516909 EVX2Q03828 476 aa8.31□□□□□ -1.08
RNU6-612P-201ENST00000516909 FBLN2P98095 1184 aa8.3□□□□□ -1.08
RNU6-612P-201ENST00000516909 SP7Q8TDD2 431 aaPredicted RBP8.28□□□□□ -1.08
RNU6-612P-201ENST00000516909 SPDYE2BA6NHP3 402 aa8.25□□□□□ -1.09
RNU6-612P-201ENST00000516909 SPDYE6P0CI01 402 aa8.25□□□□□ -1.09
RNU6-612P-201ENST00000516909 SPDYE2Q495Y8 402 aa8.25□□□□□ -1.09
RNU6-612P-201ENST00000516909 SSUH2Q9Y2M2 353 aa8.23□□□□□ -1.09
RNU6-612P-201ENST00000516909 HAX1O00165 279 aa8.19□□□□□ -1.1
RNU6-612P-201ENST00000516909 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
RNU6-612P-201ENST00000516909 CLEC11AQ9Y240 323 aa8.14□□□□□ -1.11
RNU6-612P-201ENST00000516909 PRKAR2AP13861 404 aaKnown RBP8.13□□□□□ -1.11
RNU6-612P-201ENST00000516909 FKBP8Q14318 412 aa8.12□□□□□ -1.11
RNU6-612P-201ENST00000516909 CHADLQ6NUI6 762 aa8.12□□□□□ -1.11
RNU6-612P-201ENST00000516909 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
RNU6-612P-201ENST00000516909 SPDYE1Q8NFV5 336 aaPredicted RBP8.1□□□□□ -1.11
RNU6-612P-201ENST00000516909 PABPN1Q86U42 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU6-612P-201ENST00000516909 C19orf67A6NJJ6 358 aa8.07□□□□□ -1.12
RNU6-612P-201ENST00000516909 PROM2Q8N271 834 aa7.99□□□□□ -1.13
RNU6-612P-201ENST00000516909 GABBR2O75899 941 aa7.97□□□□□ -1.13
RNU6-612P-201ENST00000516909 PRR29P0C7W0 189 aa7.97□□□□□ -1.13
RNU6-612P-201ENST00000516909 POTEIP0CG38 1075 aa7.92□□□□□ -1.14
RNU6-612P-201ENST00000516909 FARP1Q9Y4F1 1045 aaPredicted RBP7.91□□□□□ -1.14
RNU6-612P-201ENST00000516909 CREBZFQ9NS37 354 aa7.89□□□□□ -1.15
RNU6-612P-201ENST00000516909 CD44P16070 742 aaKnown RBP7.86□□□□□ -1.15
RNU6-612P-201ENST00000516909 STAG3Q9UJ98 1225 aa7.84□□□□□ -1.15
RNU6-612P-201ENST00000516909 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
RNU6-612P-201ENST00000516909 MNX1P50219 401 aaPredicted RBP7.8□□□□□ -1.16
RNU6-612P-201ENST00000516909 LHX8Q68G74 356 aa7.76□□□□□ -1.17
RNU6-612P-201ENST00000516909 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
RNU6-612P-201ENST00000516909 ZNF579Q8NAF0 562 aaKnown RBP7.74□□□□□ -1.17
RNU6-612P-201ENST00000516909 VASPP50552 380 aaPredicted RBP7.73□□□□□ -1.17
RNU6-612P-201ENST00000516909 ZRANB1Q9UGI0 708 aa7.73□□□□□ -1.17
RNU6-612P-201ENST00000516909 PHF12Q96QT6 1004 aa7.71□□□□□ -1.18
RNU6-612P-201ENST00000516909 POTEB2H3BUK9 544 aa7.68□□□□□ -1.18
RNU6-612P-201ENST00000516909 MIER1Q8N108 512 aa7.68□□□□□ -1.18
RNU6-612P-201ENST00000516909 PLCD3Q8N3E9 789 aa7.68□□□□□ -1.18
RNU6-612P-201ENST00000516909 PELP1Q8IZL8 1130 aaKnown RBP7.66□□□□□ -1.18
RNU6-612P-201ENST00000516909 PLEKHG5O94827 1062 aa7.65□□□□□ -1.18
RNU6-612P-201ENST00000516909 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
RNU6-612P-201ENST00000516909 DCBLD2Q96PD2 775 aa7.61□□□□□ -1.19
RNU6-612P-201ENST00000516909 ZBTB47Q9UFB7 747 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms