RNA–Protein interactions for RNA: ENST00000603543.1

AC009643.2-201, humanhuman

BASIC

Gene AC009643.2, Length 1,448 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009643.2-201ENST00000603543 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
AC009643.2-201ENST00000603543 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
AC009643.2-201ENST00000603543 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
AC009643.2-201ENST00000603543 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
AC009643.2-201ENST00000603543 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
AC009643.2-201ENST00000603543 FOXD1Q16676 465 aa13.3□□□□□ -0.28
AC009643.2-201ENST00000603543 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.38
AC009643.2-201ENST00000603543 MSH5O43196 834 aa12.47□□□□□ -0.41
AC009643.2-201ENST00000603543 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
AC009643.2-201ENST00000603543 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
AC009643.2-201ENST00000603543 ADRA2BP18089 450 aa12.38□□□□□ -0.43
AC009643.2-201ENST00000603543 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
AC009643.2-201ENST00000603543 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
AC009643.2-201ENST00000603543 DMRT2Q9Y5R5 561 aa11.34□□□□□ -0.59
AC009643.2-201ENST00000603543 NISCHQ9Y2I1 1504 aa11.16□□□□□ -0.62
AC009643.2-201ENST00000603543 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
AC009643.2-201ENST00000603543 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
AC009643.2-201ENST00000603543 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
AC009643.2-201ENST00000603543 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
AC009643.2-201ENST00000603543 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
AC009643.2-201ENST00000603543 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
AC009643.2-201ENST00000603543 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
AC009643.2-201ENST00000603543 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
AC009643.2-201ENST00000603543 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
AC009643.2-201ENST00000603543 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
AC009643.2-201ENST00000603543 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
AC009643.2-201ENST00000603543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.39□□□□□ -0.75
AC009643.2-201ENST00000603543 POTEHQ6S545 545 aa10.33□□□□□ -0.76
AC009643.2-201ENST00000603543 KCNA4P22459 653 aa10.32□□□□□ -0.76
AC009643.2-201ENST00000603543 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
AC009643.2-201ENST00000603543 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
AC009643.2-201ENST00000603543 SPINK5Q9NQ38 1064 aaPredicted RBP10□□□□□ -0.81
AC009643.2-201ENST00000603543 CAPN15O75808 1086 aa9.99□□□□□ -0.81
AC009643.2-201ENST00000603543 DSG3P32926 999 aa9.96□□□□□ -0.82
AC009643.2-201ENST00000603543 APLP2Q06481 763 aa9.92□□□□□ -0.82
AC009643.2-201ENST00000603543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
AC009643.2-201ENST00000603543 HNRNPUL2Q1KMD3 747 aaKnown RBP9.91□□□□□ -0.82
AC009643.2-201ENST00000603543 SAMD1Q6SPF0 538 aaPredicted RBP9.85□□□□□ -0.83
AC009643.2-201ENST00000603543 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
AC009643.2-201ENST00000603543 TRHP20396 242 aaPredicted RBP9.82□□□□□ -0.84
AC009643.2-201ENST00000603543 CCDC180Q9P1Z9 1646 aa9.8□□□□□ -0.84
AC009643.2-201ENST00000603543 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
AC009643.2-201ENST00000603543 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
AC009643.2-201ENST00000603543 ABCB7O75027 752 aa9.73□□□□□ -0.85
AC009643.2-201ENST00000603543 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.87
AC009643.2-201ENST00000603543 POLA2Q14181 598 aa9.58□□□□□ -0.88
AC009643.2-201ENST00000603543 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
AC009643.2-201ENST00000603543 ATF5Q9Y2D1 282 aaPredicted RBP9.51□□□□□ -0.89
AC009643.2-201ENST00000603543 ZBTB22O15209 634 aa9.48□□□□□ -0.89
AC009643.2-201ENST00000603543 ZCCHC6Q5VYS8 1495 aaKnown RBP9.43□□□□□ -0.9
AC009643.2-201ENST00000603543 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
AC009643.2-201ENST00000603543 ATXN8OSP0DMR3 200 aa9.4□□□□□ -0.9
AC009643.2-201ENST00000603543 AKT1S1Q96B36 256 aa9.31□□□□□ -0.92
AC009643.2-201ENST00000603543 CHRDL2Q6WN34 429 aa9.29□□□□□ -0.92
AC009643.2-201ENST00000603543 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
AC009643.2-201ENST00000603543 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
AC009643.2-201ENST00000603543 DCAF1Q9Y4B6 1507 aa9.23□□□□□ -0.93
AC009643.2-201ENST00000603543 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
AC009643.2-201ENST00000603543 FBLN2P98095 1184 aa9.16□□□□□ -0.94
AC009643.2-201ENST00000603543 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
AC009643.2-201ENST00000603543 ABCC9O60706 1549 aa9.13□□□□□ -0.95
AC009643.2-201ENST00000603543 SHROOM4Q9ULL8 1493 aa9.13□□□□□ -0.95
AC009643.2-201ENST00000603543 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
AC009643.2-201ENST00000603543 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
AC009643.2-201ENST00000603543 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
AC009643.2-201ENST00000603543 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
AC009643.2-201ENST00000603543 MYO15BQ96JP2 1530 aa9.08□□□□□ -0.96
AC009643.2-201ENST00000603543 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
AC009643.2-201ENST00000603543 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
AC009643.2-201ENST00000603543 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
AC009643.2-201ENST00000603543 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
AC009643.2-201ENST00000603543 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
AC009643.2-201ENST00000603543 NACADO15069 1562 aa9.03□□□□□ -0.96
AC009643.2-201ENST00000603543 SCRIBQ14160 1630 aa9.01□□□□□ -0.97
AC009643.2-201ENST00000603543 ZNF692Q9BU19 519 aaPredicted RBP8.99□□□□□ -0.97
AC009643.2-201ENST00000603543 SSUH2Q9Y2M2 353 aa8.98□□□□□ -0.97
AC009643.2-201ENST00000603543 RB1CC1Q8TDY2 1594 aa8.96□□□□□ -0.98
AC009643.2-201ENST00000603543 SPDYE1Q8NFV5 336 aaPredicted RBP8.95□□□□□ -0.98
AC009643.2-201ENST00000603543 HAX1O00165 279 aa8.9□□□□□ -0.98
AC009643.2-201ENST00000603543 UNC13AQ9UPW8 1703 aa8.9□□□□□ -0.98
AC009643.2-201ENST00000603543 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
AC009643.2-201ENST00000603543 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
AC009643.2-201ENST00000603543 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
AC009643.2-201ENST00000603543 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
AC009643.2-201ENST00000603543 PRR29P0C7W0 189 aa8.79□□□□□ -1
AC009643.2-201ENST00000603543 EVX2Q03828 476 aa8.79□□□□□ -1
AC009643.2-201ENST00000603543 C19orf67A6NJJ6 358 aa8.74□□□□□ -1.01
AC009643.2-201ENST00000603543 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
AC009643.2-201ENST00000603543 BICRAQ9NZM4 1560 aa8.72□□□□□ -1.01
AC009643.2-201ENST00000603543 CHADLQ6NUI6 762 aa8.71□□□□□ -1.01
AC009643.2-201ENST00000603543 LHX8Q68G74 356 aa8.68□□□□□ -1.02
AC009643.2-201ENST00000603543 CECR2Q9BXF3 1484 aa8.66□□□□□ -1.02
AC009643.2-201ENST00000603543 SPDYE4A6NLX3 237 aa8.65□□□□□ -1.02
AC009643.2-201ENST00000603543 RSF1Q96T23 1441 aaPredicted RBP8.65□□□□□ -1.03
AC009643.2-201ENST00000603543 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
AC009643.2-201ENST00000603543 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
AC009643.2-201ENST00000603543 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
AC009643.2-201ENST00000603543 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
AC009643.2-201ENST00000603543 BAZ1AQ9NRL2 1556 aaPredicted RBP8.63□□□□□ -1.03
AC009643.2-201ENST00000603543 WIZO95785 1651 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms