RNA–Protein interactions for RNA: ENST00000603543.1

AC009643.2-201, humanhuman

BASIC

Gene AC009643.2, Length 1,448 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009643.2-201ENST00000603543 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
AC009643.2-201ENST00000603543 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
AC009643.2-201ENST00000603543 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
AC009643.2-201ENST00000603543 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
AC009643.2-201ENST00000603543 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
AC009643.2-201ENST00000603543 FOXD1Q16676 465 aa13.3□□□□□ -0.28
AC009643.2-201ENST00000603543 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.38
AC009643.2-201ENST00000603543 MSH5O43196 834 aa12.47□□□□□ -0.41
AC009643.2-201ENST00000603543 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
AC009643.2-201ENST00000603543 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
AC009643.2-201ENST00000603543 ADRA2BP18089 450 aa12.38□□□□□ -0.43
AC009643.2-201ENST00000603543 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
AC009643.2-201ENST00000603543 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
AC009643.2-201ENST00000603543 DMRT2Q9Y5R5 561 aa11.34□□□□□ -0.59
AC009643.2-201ENST00000603543 NISCHQ9Y2I1 1504 aa11.16□□□□□ -0.62
AC009643.2-201ENST00000603543 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
AC009643.2-201ENST00000603543 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
AC009643.2-201ENST00000603543 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
AC009643.2-201ENST00000603543 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
AC009643.2-201ENST00000603543 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
AC009643.2-201ENST00000603543 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
AC009643.2-201ENST00000603543 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
AC009643.2-201ENST00000603543 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
AC009643.2-201ENST00000603543 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
AC009643.2-201ENST00000603543 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
AC009643.2-201ENST00000603543 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
AC009643.2-201ENST00000603543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.39□□□□□ -0.75
AC009643.2-201ENST00000603543 POTEHQ6S545 545 aa10.33□□□□□ -0.76
AC009643.2-201ENST00000603543 KCNA4P22459 653 aa10.32□□□□□ -0.76
AC009643.2-201ENST00000603543 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
AC009643.2-201ENST00000603543 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
AC009643.2-201ENST00000603543 SPINK5Q9NQ38 1064 aaPredicted RBP10□□□□□ -0.81
AC009643.2-201ENST00000603543 CAPN15O75808 1086 aa9.99□□□□□ -0.81
AC009643.2-201ENST00000603543 DSG3P32926 999 aa9.96□□□□□ -0.82
AC009643.2-201ENST00000603543 APLP2Q06481 763 aa9.92□□□□□ -0.82
AC009643.2-201ENST00000603543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
AC009643.2-201ENST00000603543 HNRNPUL2Q1KMD3 747 aaKnown RBP9.91□□□□□ -0.82
AC009643.2-201ENST00000603543 SAMD1Q6SPF0 538 aaPredicted RBP9.85□□□□□ -0.83
AC009643.2-201ENST00000603543 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
AC009643.2-201ENST00000603543 TRHP20396 242 aaPredicted RBP9.82□□□□□ -0.84
AC009643.2-201ENST00000603543 CCDC180Q9P1Z9 1646 aa9.8□□□□□ -0.84
AC009643.2-201ENST00000603543 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
AC009643.2-201ENST00000603543 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
AC009643.2-201ENST00000603543 ABCB7O75027 752 aa9.73□□□□□ -0.85
AC009643.2-201ENST00000603543 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.87
AC009643.2-201ENST00000603543 POLA2Q14181 598 aa9.58□□□□□ -0.88
AC009643.2-201ENST00000603543 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
AC009643.2-201ENST00000603543 ATF5Q9Y2D1 282 aaPredicted RBP9.51□□□□□ -0.89
AC009643.2-201ENST00000603543 ZBTB22O15209 634 aa9.48□□□□□ -0.89
AC009643.2-201ENST00000603543 ZCCHC6Q5VYS8 1495 aaKnown RBP9.43□□□□□ -0.9
AC009643.2-201ENST00000603543 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
AC009643.2-201ENST00000603543 ATXN8OSP0DMR3 200 aa9.4□□□□□ -0.9
AC009643.2-201ENST00000603543 AKT1S1Q96B36 256 aa9.31□□□□□ -0.92
AC009643.2-201ENST00000603543 CHRDL2Q6WN34 429 aa9.29□□□□□ -0.92
AC009643.2-201ENST00000603543 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
AC009643.2-201ENST00000603543 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
AC009643.2-201ENST00000603543 DCAF1Q9Y4B6 1507 aa9.23□□□□□ -0.93
AC009643.2-201ENST00000603543 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
AC009643.2-201ENST00000603543 FBLN2P98095 1184 aa9.16□□□□□ -0.94
AC009643.2-201ENST00000603543 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
AC009643.2-201ENST00000603543 ABCC9O60706 1549 aa9.13□□□□□ -0.95
AC009643.2-201ENST00000603543 SHROOM4Q9ULL8 1493 aa9.13□□□□□ -0.95
AC009643.2-201ENST00000603543 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
AC009643.2-201ENST00000603543 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
AC009643.2-201ENST00000603543 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
AC009643.2-201ENST00000603543 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
AC009643.2-201ENST00000603543 MYO15BQ96JP2 1530 aa9.08□□□□□ -0.96
AC009643.2-201ENST00000603543 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
AC009643.2-201ENST00000603543 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
AC009643.2-201ENST00000603543 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
AC009643.2-201ENST00000603543 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
AC009643.2-201ENST00000603543 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
AC009643.2-201ENST00000603543 NACADO15069 1562 aa9.03□□□□□ -0.96
AC009643.2-201ENST00000603543 SCRIBQ14160 1630 aa9.01□□□□□ -0.97
AC009643.2-201ENST00000603543 ZNF692Q9BU19 519 aaPredicted RBP8.99□□□□□ -0.97
AC009643.2-201ENST00000603543 SSUH2Q9Y2M2 353 aa8.98□□□□□ -0.97
AC009643.2-201ENST00000603543 RB1CC1Q8TDY2 1594 aa8.96□□□□□ -0.98
AC009643.2-201ENST00000603543 SPDYE1Q8NFV5 336 aaPredicted RBP8.95□□□□□ -0.98
AC009643.2-201ENST00000603543 HAX1O00165 279 aa8.9□□□□□ -0.98
AC009643.2-201ENST00000603543 UNC13AQ9UPW8 1703 aa8.9□□□□□ -0.98
AC009643.2-201ENST00000603543 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
AC009643.2-201ENST00000603543 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
AC009643.2-201ENST00000603543 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
AC009643.2-201ENST00000603543 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
AC009643.2-201ENST00000603543 PRR29P0C7W0 189 aa8.79□□□□□ -1
AC009643.2-201ENST00000603543 EVX2Q03828 476 aa8.79□□□□□ -1
AC009643.2-201ENST00000603543 C19orf67A6NJJ6 358 aa8.74□□□□□ -1.01
AC009643.2-201ENST00000603543 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
AC009643.2-201ENST00000603543 BICRAQ9NZM4 1560 aa8.72□□□□□ -1.01
AC009643.2-201ENST00000603543 CHADLQ6NUI6 762 aa8.71□□□□□ -1.01
AC009643.2-201ENST00000603543 LHX8Q68G74 356 aa8.68□□□□□ -1.02
AC009643.2-201ENST00000603543 CECR2Q9BXF3 1484 aa8.66□□□□□ -1.02
AC009643.2-201ENST00000603543 SPDYE4A6NLX3 237 aa8.65□□□□□ -1.02
AC009643.2-201ENST00000603543 RSF1Q96T23 1441 aaPredicted RBP8.65□□□□□ -1.03
AC009643.2-201ENST00000603543 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
AC009643.2-201ENST00000603543 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
AC009643.2-201ENST00000603543 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
AC009643.2-201ENST00000603543 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
AC009643.2-201ENST00000603543 BAZ1AQ9NRL2 1556 aaPredicted RBP8.63□□□□□ -1.03
AC009643.2-201ENST00000603543 WIZO95785 1651 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms