RNA–Protein interactions for RNA: ENST00000368507.7

ROS1-201, Transcript of ROS proto-oncogene 1, receptor tyrosine kinase, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ROS1, Length 7,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1-201ENST00000368507 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
ROS1-201ENST00000368507 MYT1Q01538 1121 aa8.58□□□□□ -1.04
ROS1-201ENST00000368507 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
ROS1-201ENST00000368507 FAM9AQ8IZU1 332 aaPredicted RBP8.36□□□□□ -1.07
ROS1-201ENST00000368507 APLP2Q06481 763 aa8.1□□□□□ -1.11
ROS1-201ENST00000368507 SUPT5HO00267 1087 aaKnown RBP8.06□□□□□ -1.12
ROS1-201ENST00000368507 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
ROS1-201ENST00000368507 TTBK1Q5TCY1 1321 aaPredicted RBP8.02□□□□□ -1.13
ROS1-201ENST00000368507 SHROOM4Q9ULL8 1493 aa7.93□□□□□ -1.14
ROS1-201ENST00000368507 NISCHQ9Y2I1 1504 aa7.92□□□□□ -1.14
ROS1-201ENST00000368507 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.14
ROS1-201ENST00000368507 ERICH6Q7L0X2 663 aa7.88□□□□□ -1.15
ROS1-201ENST00000368507 MYT1LQ9UL68 1186 aa7.86□□□□□ -1.15
ROS1-201ENST00000368507 RANGAP1P46060 587 aaPredicted RBP7.81□□□□□ -1.16
ROS1-201ENST00000368507 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
ROS1-201ENST00000368507 CHIC1Q5VXU3 224 aa7.67□□□□□ -1.18
ROS1-201ENST00000368507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.66□□□□□ -1.18
ROS1-201ENST00000368507 HNRNPUL2Q1KMD3 747 aaKnown RBP7.66□□□□□ -1.18
ROS1-201ENST00000368507 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
ROS1-201ENST00000368507 SLC4A1APQ9BWU0 796 aaKnown RBP7.58□□□□□ -1.2
ROS1-201ENST00000368507 CENPBP07199 599 aaPredicted RBP7.57□□□□□ -1.2
ROS1-201ENST00000368507 TRIM41Q8WV44 630 aa7.52□□□□□ -1.21
ROS1-201ENST00000368507 POLR3GLQ9BT43 218 aa7.51□□□□□ -1.21
ROS1-201ENST00000368507 NEFLP07196 543 aa7.51□□□□□ -1.21
ROS1-201ENST00000368507 PCGF6Q9BYE7 350 aa7.5□□□□□ -1.21
ROS1-201ENST00000368507 DAXXQ9UER7 740 aaPredicted RBP7.48□□□□□ -1.21
ROS1-201ENST00000368507 BCANQ96GW7 911 aa7.43□□□□□ -1.22
ROS1-201ENST00000368507 SLC24A1O60721 1099 aa7.41□□□□□ -1.22
ROS1-201ENST00000368507 ZEB1P37275 1124 aaPredicted RBP7.37□□□□□ -1.23
ROS1-201ENST00000368507 ITGAEP38570 1179 aa7.37□□□□□ -1.23
ROS1-201ENST00000368507 YTHDC1Q96MU7 727 aaKnown RBP7.36□□□□□ -1.23
ROS1-201ENST00000368507 ESF1Q9H501 851 aaKnown RBP7.34□□□□□ -1.23
ROS1-201ENST00000368507 FBLN2P98095 1184 aa7.33□□□□□ -1.24
ROS1-201ENST00000368507 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
ROS1-201ENST00000368507 ZBTB47Q9UFB7 747 aaPredicted RBP7.31□□□□□ -1.24
ROS1-201ENST00000368507 PLPPR3Q6T4P5 718 aa7.3□□□□□ -1.24
ROS1-201ENST00000368507 CLSPNQ9HAW4 1339 aa7.29□□□□□ -1.24
ROS1-201ENST00000368507 ZNF316A6NFI3 1004 aaPredicted RBP7.27□□□□□ -1.25
ROS1-201ENST00000368507 HRCP23327 699 aa7.27□□□□□ -1.25
ROS1-201ENST00000368507 NEFMP07197 916 aa7.25□□□□□ -1.25
ROS1-201ENST00000368507 TRIM52Q96A61 297 aa7.24□□□□□ -1.25
ROS1-201ENST00000368507 GLIPR1L2Q4G1C9 344 aa7.23□□□□□ -1.25
ROS1-201ENST00000368507 STAG3Q9UJ98 1225 aa7.22□□□□□ -1.25
ROS1-201ENST00000368507 PPARGC1BQ86YN6 1023 aaKnown RBP7.22□□□□□ -1.25
ROS1-201ENST00000368507 FAM50AQ14320 339 aaKnown RBP7.21□□□□□ -1.26
ROS1-201ENST00000368507 NPM1P06748 294 aaKnown RBP eCLIP7.21□□□□□ -1.26
ROS1-201ENST00000368507 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
ROS1-201ENST00000368507 SCAF1Q9H7N4 1312 aaKnown RBP7.18□□□□□ -1.26
ROS1-201ENST00000368507 ABCC9O60706 1549 aa7.17□□□□□ -1.26
ROS1-201ENST00000368507 BCL11AQ9H165 835 aa7.16□□□□□ -1.26
ROS1-201ENST00000368507 CANXP27824 592 aaKnown RBP7.15□□□□□ -1.26
ROS1-201ENST00000368507 A0A0G2JS52 829 aa7.15□□□□□ -1.26
ROS1-201ENST00000368507 EIF5BO60841 1220 aaKnown RBP7.14□□□□□ -1.27
ROS1-201ENST00000368507 ZNF326Q5BKZ1 582 aaKnown RBP7.14□□□□□ -1.27
ROS1-201ENST00000368507 RTL5Q5HYW3 569 aaPredicted RBP7.11□□□□□ -1.27
ROS1-201ENST00000368507 CHGAP10645 457 aaKnown RBP7.09□□□□□ -1.27
ROS1-201ENST00000368507 ZNF777Q9ULD5 760 aaPredicted RBP7.07□□□□□ -1.28
ROS1-201ENST00000368507 PRKCSHP14314 528 aaPredicted RBP7.07□□□□□ -1.28
ROS1-201ENST00000368507 HAP1P54257 671 aaPredicted RBP7.06□□□□□ -1.28
ROS1-201ENST00000368507 NPM2Q86SE8 214 aaKnown RBP7.06□□□□□ -1.28
ROS1-201ENST00000368507 NEUROD1Q13562 356 aa7.06□□□□□ -1.28
ROS1-201ENST00000368507 ARID3CA6NKF2 412 aa7.06□□□□□ -1.28
ROS1-201ENST00000368507 C14orf37Q86TY3 774 aa7.05□□□□□ -1.28
ROS1-201ENST00000368507 ZBTB7CA1YPR0 619 aa7.04□□□□□ -1.28
ROS1-201ENST00000368507 CDK11AQ9UQ88 783 aaPredicted RBP7.04□□□□□ -1.28
ROS1-201ENST00000368507 CDK11BP21127 795 aaKnown RBP7.03□□□□□ -1.28
ROS1-201ENST00000368507 GTF3C3Q9Y5Q9 886 aa7.02□□□□□ -1.29
ROS1-201ENST00000368507 TRIM26Q12899 539 aaPredicted RBP7.01□□□□□ -1.29
ROS1-201ENST00000368507 ARID4BQ4LE39 1312 aaPredicted RBP7□□□□□ -1.29
ROS1-201ENST00000368507 PLEKHG5O94827 1062 aa6.98□□□□□ -1.29
ROS1-201ENST00000368507 ACIN1Q9UKV3 1341 aaKnown RBP6.98□□□□□ -1.29
ROS1-201ENST00000368507 NPHP1O15259 732 aa6.97□□□□□ -1.29
ROS1-201ENST00000368507 ANP32EQ9BTT0 268 aa6.97□□□□□ -1.29
ROS1-201ENST00000368507 P3H3Q8IVL6 736 aa6.96□□□□□ -1.29
ROS1-201ENST00000368507 PPP1R15AO75807 674 aaPredicted RBP6.96□□□□□ -1.3
ROS1-201ENST00000368507 ANP32CO43423 234 aa6.96□□□□□ -1.3
ROS1-201ENST00000368507 TRHP20396 242 aaPredicted RBP6.96□□□□□ -1.3
ROS1-201ENST00000368507 ARXQ96QS3 562 aa6.92□□□□□ -1.3
ROS1-201ENST00000368507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.92□□□□□ -1.3
ROS1-201ENST00000368507 HSP90AA1P07900 732 aaKnown RBP6.9□□□□□ -1.3
ROS1-201ENST00000368507 CHMP7Q8WUX9 453 aaPredicted RBP6.9□□□□□ -1.3
ROS1-201ENST00000368507 ANP32BQ92688 251 aaKnown RBP6.9□□□□□ -1.31
ROS1-201ENST00000368507 TULP1O00294 542 aaPredicted RBP6.89□□□□□ -1.31
ROS1-201ENST00000368507 AEBP2Q6ZN18 517 aaPredicted RBP6.89□□□□□ -1.31
ROS1-201ENST00000368507 SENP3Q9H4L4 574 aaPredicted RBP6.89□□□□□ -1.31
ROS1-201ENST00000368507 MYH16Q9H6N6 1097 aa6.86□□□□□ -1.31
ROS1-201ENST00000368507 ERCC6Q03468 1493 aa6.85□□□□□ -1.31
ROS1-201ENST00000368507 UPF2Q9HAU5 1272 aaKnown RBP6.85□□□□□ -1.31
ROS1-201ENST00000368507 LMOD2Q6P5Q4 547 aa6.84□□□□□ -1.31
ROS1-201ENST00000368507 LOC105371045A0A1W2PR82 267 aa6.83□□□□□ -1.32
ROS1-201ENST00000368507 PODXL2Q9NZ53 605 aa6.82□□□□□ -1.32
ROS1-201ENST00000368507 WDR43Q15061 677 aaKnown RBP eCLIP6.82□□□□□ -1.32
ROS1-201ENST00000368507 KCNH8Q96L42 1107 aa6.82□□□□□ -1.32
ROS1-201ENST00000368507 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
ROS1-201ENST00000368507 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
ROS1-201ENST00000368507 TMX4Q9H1E5 349 aaPredicted RBP6.8□□□□□ -1.32
ROS1-201ENST00000368507 GOLGA2Q08379 1002 aa6.8□□□□□ -1.32
ROS1-201ENST00000368507 NCBP3Q53F19 620 aaKnown RBP6.79□□□□□ -1.32
ROS1-201ENST00000368507 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.79□□□□□ -1.32
ROS1-201ENST00000368507 EIF4G2P78344 907 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms