RNA–Protein interactions for RNA: ENST00000516957.1

RNU6-255P-201, Transcript of RNA, U6 small nuclear 255, pseudogene, humanhuman

BASIC

Gene RNU6-255P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-255P-201ENST00000516957 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
RNU6-255P-201ENST00000516957 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
RNU6-255P-201ENST00000516957 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
RNU6-255P-201ENST00000516957 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
RNU6-255P-201ENST00000516957 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
RNU6-255P-201ENST00000516957 FOXD1Q16676 465 aa17.18■□□□□ 0.34
RNU6-255P-201ENST00000516957 MSH5O43196 834 aa16.54■□□□□ 0.24
RNU6-255P-201ENST00000516957 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
RNU6-255P-201ENST00000516957 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
RNU6-255P-201ENST00000516957 ADRA2BP18089 450 aa15.13■□□□□ 0.01
RNU6-255P-201ENST00000516957 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
RNU6-255P-201ENST00000516957 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
RNU6-255P-201ENST00000516957 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
RNU6-255P-201ENST00000516957 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
RNU6-255P-201ENST00000516957 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
RNU6-255P-201ENST00000516957 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
RNU6-255P-201ENST00000516957 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
RNU6-255P-201ENST00000516957 POTEHQ6S545 545 aa13.85□□□□□ -0.19
RNU6-255P-201ENST00000516957 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
RNU6-255P-201ENST00000516957 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
RNU6-255P-201ENST00000516957 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
RNU6-255P-201ENST00000516957 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
RNU6-255P-201ENST00000516957 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
RNU6-255P-201ENST00000516957 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
RNU6-255P-201ENST00000516957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNU6-255P-201ENST00000516957 DSG3P32926 999 aa12.74□□□□□ -0.37
RNU6-255P-201ENST00000516957 CAPN15O75808 1086 aa12.59□□□□□ -0.39
RNU6-255P-201ENST00000516957 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
RNU6-255P-201ENST00000516957 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
RNU6-255P-201ENST00000516957 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
RNU6-255P-201ENST00000516957 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
RNU6-255P-201ENST00000516957 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
RNU6-255P-201ENST00000516957 ABCB7O75027 752 aa12.18□□□□□ -0.46
RNU6-255P-201ENST00000516957 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
RNU6-255P-201ENST00000516957 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
RNU6-255P-201ENST00000516957 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
RNU6-255P-201ENST00000516957 APLP2Q06481 763 aa11.98□□□□□ -0.49
RNU6-255P-201ENST00000516957 HAX1O00165 279 aa11.92□□□□□ -0.5
RNU6-255P-201ENST00000516957 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
RNU6-255P-201ENST00000516957 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
RNU6-255P-201ENST00000516957 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
RNU6-255P-201ENST00000516957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
RNU6-255P-201ENST00000516957 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
RNU6-255P-201ENST00000516957 LHX8Q68G74 356 aa11.7□□□□□ -0.54
RNU6-255P-201ENST00000516957 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
RNU6-255P-201ENST00000516957 EVX2Q03828 476 aa11.64□□□□□ -0.55
RNU6-255P-201ENST00000516957 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
RNU6-255P-201ENST00000516957 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
RNU6-255P-201ENST00000516957 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
RNU6-255P-201ENST00000516957 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
RNU6-255P-201ENST00000516957 POLA2Q14181 598 aa11.55□□□□□ -0.56
RNU6-255P-201ENST00000516957 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
RNU6-255P-201ENST00000516957 GABBR2O75899 941 aa11.35□□□□□ -0.59
RNU6-255P-201ENST00000516957 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
RNU6-255P-201ENST00000516957 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
RNU6-255P-201ENST00000516957 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
RNU6-255P-201ENST00000516957 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
RNU6-255P-201ENST00000516957 POTEMA6NI47 508 aa11.08□□□□□ -0.64
RNU6-255P-201ENST00000516957 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
RNU6-255P-201ENST00000516957 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
RNU6-255P-201ENST00000516957 POTEGQ6S5H5 508 aa11□□□□□ -0.65
RNU6-255P-201ENST00000516957 PCDH10Q9P2E7 1040 aa10.97□□□□□ -0.65
RNU6-255P-201ENST00000516957 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
RNU6-255P-201ENST00000516957 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
RNU6-255P-201ENST00000516957 OTUD5Q96G74 571 aa10.88□□□□□ -0.67
RNU6-255P-201ENST00000516957 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
RNU6-255P-201ENST00000516957 CLCN6P51797 869 aa10.83□□□□□ -0.68
RNU6-255P-201ENST00000516957 CHADLQ6NUI6 762 aa10.81□□□□□ -0.68
RNU6-255P-201ENST00000516957 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
RNU6-255P-201ENST00000516957 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
RNU6-255P-201ENST00000516957 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
RNU6-255P-201ENST00000516957 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
RNU6-255P-201ENST00000516957 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
RNU6-255P-201ENST00000516957 KCNA4P22459 653 aa10.73□□□□□ -0.69
RNU6-255P-201ENST00000516957 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
RNU6-255P-201ENST00000516957 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
RNU6-255P-201ENST00000516957 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
RNU6-255P-201ENST00000516957 FBLN2P98095 1184 aa10.52□□□□□ -0.73
RNU6-255P-201ENST00000516957 ZNF579Q8NAF0 562 aaKnown RBP10.52□□□□□ -0.73
RNU6-255P-201ENST00000516957 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
RNU6-255P-201ENST00000516957 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
RNU6-255P-201ENST00000516957 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
RNU6-255P-201ENST00000516957 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
RNU6-255P-201ENST00000516957 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
RNU6-255P-201ENST00000516957 ZRANB1Q9UGI0 708 aa10.44□□□□□ -0.74
RNU6-255P-201ENST00000516957 MAMSTRQ6ZN01 415 aa10.4□□□□□ -0.74
RNU6-255P-201ENST00000516957 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
RNU6-255P-201ENST00000516957 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
RNU6-255P-201ENST00000516957 PELP1Q8IZL8 1130 aaKnown RBP10.35□□□□□ -0.75
RNU6-255P-201ENST00000516957 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
RNU6-255P-201ENST00000516957 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
RNU6-255P-201ENST00000516957 PABPN1Q86U42 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
RNU6-255P-201ENST00000516957 SCUBE2Q9NQ36 999 aa10.28□□□□□ -0.76
RNU6-255P-201ENST00000516957 C7P10643 843 aa10.25□□□□□ -0.77
RNU6-255P-201ENST00000516957 MKRN4PQ13434 485 aaPredicted RBP10.25□□□□□ -0.77
RNU6-255P-201ENST00000516957 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
RNU6-255P-201ENST00000516957 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
RNU6-255P-201ENST00000516957 ASTLQ6HA08 431 aaPredicted RBP10.18□□□□□ -0.78
RNU6-255P-201ENST00000516957 PHF12Q96QT6 1004 aa10.18□□□□□ -0.78
RNU6-255P-201ENST00000516957 PAK3O75914 559 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms