RNA–Protein interactions for RNA: ENST00000404377.3

TNFSF18-201, Transcript of TNF superfamily member 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF18, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF18-201ENST00000404377 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
TNFSF18-201ENST00000404377 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
TNFSF18-201ENST00000404377 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
TNFSF18-201ENST00000404377 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
TNFSF18-201ENST00000404377 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.09
TNFSF18-201ENST00000404377 FOXD1Q16676 465 aa14.88□□□□□ -0.03
TNFSF18-201ENST00000404377 MSH5O43196 834 aa14.59□□□□□ -0.07
TNFSF18-201ENST00000404377 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
TNFSF18-201ENST00000404377 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
TNFSF18-201ENST00000404377 ADRA2BP18089 450 aa13□□□□□ -0.33
TNFSF18-201ENST00000404377 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
TNFSF18-201ENST00000404377 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
TNFSF18-201ENST00000404377 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
TNFSF18-201ENST00000404377 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
TNFSF18-201ENST00000404377 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
TNFSF18-201ENST00000404377 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
TNFSF18-201ENST00000404377 POTEHQ6S545 545 aa12.11□□□□□ -0.47
TNFSF18-201ENST00000404377 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
TNFSF18-201ENST00000404377 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
TNFSF18-201ENST00000404377 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
TNFSF18-201ENST00000404377 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
TNFSF18-201ENST00000404377 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
TNFSF18-201ENST00000404377 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
TNFSF18-201ENST00000404377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.62
TNFSF18-201ENST00000404377 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
TNFSF18-201ENST00000404377 DSG3P32926 999 aa11.06□□□□□ -0.64
TNFSF18-201ENST00000404377 CAPN15O75808 1086 aa10.94□□□□□ -0.66
TNFSF18-201ENST00000404377 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
TNFSF18-201ENST00000404377 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
TNFSF18-201ENST00000404377 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
TNFSF18-201ENST00000404377 APLP2Q06481 763 aa10.75□□□□□ -0.69
TNFSF18-201ENST00000404377 SPINK5Q9NQ38 1064 aaPredicted RBP10.74□□□□□ -0.69
TNFSF18-201ENST00000404377 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
TNFSF18-201ENST00000404377 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
TNFSF18-201ENST00000404377 ZNF219Q9P2Y4 722 aaPredicted RBP10.6□□□□□ -0.71
TNFSF18-201ENST00000404377 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
TNFSF18-201ENST00000404377 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
TNFSF18-201ENST00000404377 ABCB7O75027 752 aa10.46□□□□□ -0.74
TNFSF18-201ENST00000404377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
TNFSF18-201ENST00000404377 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
TNFSF18-201ENST00000404377 HAX1O00165 279 aa10.38□□□□□ -0.75
TNFSF18-201ENST00000404377 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
TNFSF18-201ENST00000404377 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
TNFSF18-201ENST00000404377 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
TNFSF18-201ENST00000404377 LHX8Q68G74 356 aa10.24□□□□□ -0.77
TNFSF18-201ENST00000404377 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
TNFSF18-201ENST00000404377 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
TNFSF18-201ENST00000404377 MYT1Q01538 1121 aa10.14□□□□□ -0.79
TNFSF18-201ENST00000404377 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
TNFSF18-201ENST00000404377 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
TNFSF18-201ENST00000404377 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
TNFSF18-201ENST00000404377 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
TNFSF18-201ENST00000404377 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
TNFSF18-201ENST00000404377 POLA2Q14181 598 aa9.97□□□□□ -0.81
TNFSF18-201ENST00000404377 EVX2Q03828 476 aa9.94□□□□□ -0.82
TNFSF18-201ENST00000404377 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
TNFSF18-201ENST00000404377 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
TNFSF18-201ENST00000404377 GABBR2O75899 941 aa9.88□□□□□ -0.83
TNFSF18-201ENST00000404377 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
TNFSF18-201ENST00000404377 C19orf67A6NJJ6 358 aa9.85□□□□□ -0.83
TNFSF18-201ENST00000404377 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
TNFSF18-201ENST00000404377 CLCN6P51797 869 aa9.77□□□□□ -0.85
TNFSF18-201ENST00000404377 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
TNFSF18-201ENST00000404377 PRKCSHP14314 528 aaPredicted RBP9.7□□□□□ -0.86
TNFSF18-201ENST00000404377 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
TNFSF18-201ENST00000404377 POTEMA6NI47 508 aa9.64□□□□□ -0.87
TNFSF18-201ENST00000404377 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
TNFSF18-201ENST00000404377 OSCARQ8IYS5 282 aa9.63□□□□□ -0.87
TNFSF18-201ENST00000404377 POTEGQ6S5H5 508 aa9.58□□□□□ -0.88
TNFSF18-201ENST00000404377 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
TNFSF18-201ENST00000404377 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
TNFSF18-201ENST00000404377 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
TNFSF18-201ENST00000404377 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
TNFSF18-201ENST00000404377 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
TNFSF18-201ENST00000404377 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
TNFSF18-201ENST00000404377 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
TNFSF18-201ENST00000404377 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
TNFSF18-201ENST00000404377 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
TNFSF18-201ENST00000404377 EHMT2Q96KQ7 1210 aa9.32□□□□□ -0.92
TNFSF18-201ENST00000404377 MAMSTRQ6ZN01 415 aa9.29□□□□□ -0.92
TNFSF18-201ENST00000404377 FBLN2P98095 1184 aa9.27□□□□□ -0.93
TNFSF18-201ENST00000404377 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
TNFSF18-201ENST00000404377 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
TNFSF18-201ENST00000404377 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
TNFSF18-201ENST00000404377 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
TNFSF18-201ENST00000404377 ARXQ96QS3 562 aa9.18□□□□□ -0.94
TNFSF18-201ENST00000404377 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
TNFSF18-201ENST00000404377 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
TNFSF18-201ENST00000404377 SSUH2Q9Y2M2 353 aa9.15□□□□□ -0.94
TNFSF18-201ENST00000404377 POTEB2H3BUK9 544 aa9.13□□□□□ -0.95
TNFSF18-201ENST00000404377 ZNF692Q9BU19 519 aaPredicted RBP9.13□□□□□ -0.95
TNFSF18-201ENST00000404377 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
TNFSF18-201ENST00000404377 EIF5BO60841 1220 aaKnown RBP9.1□□□□□ -0.95
TNFSF18-201ENST00000404377 ZRANB1Q9UGI0 708 aa9.08□□□□□ -0.96
TNFSF18-201ENST00000404377 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
TNFSF18-201ENST00000404377 AMER1Q5JTC6 1135 aaPredicted RBP9.05□□□□□ -0.96
TNFSF18-201ENST00000404377 CDAN1Q8IWY9 1227 aa9.05□□□□□ -0.96
TNFSF18-201ENST00000404377 C7P10643 843 aa9.04□□□□□ -0.96
TNFSF18-201ENST00000404377 KCNA4P22459 653 aa9.04□□□□□ -0.96
TNFSF18-201ENST00000404377 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms