RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
RNU1-43P-201ENST00000365052 ABCC9O60706 1549 aa11.51□□□□□ -0.57
RNU1-43P-201ENST00000365052 CCDC180Q9P1Z9 1646 aa11.46□□□□□ -0.58
RNU1-43P-201ENST00000365052 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
RNU1-43P-201ENST00000365052 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
RNU1-43P-201ENST00000365052 NACADO15069 1562 aa10.85□□□□□ -0.67
RNU1-43P-201ENST00000365052 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
RNU1-43P-201ENST00000365052 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
RNU1-43P-201ENST00000365052 UNC13AQ9UPW8 1703 aa10.69□□□□□ -0.7
RNU1-43P-201ENST00000365052 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
RNU1-43P-201ENST00000365052 MYO15BQ96JP2 1530 aa10.67□□□□□ -0.7
RNU1-43P-201ENST00000365052 BICRAQ9NZM4 1560 aa10.6□□□□□ -0.71
RNU1-43P-201ENST00000365052 DCAF1Q9Y4B6 1507 aa10.59□□□□□ -0.71
RNU1-43P-201ENST00000365052 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
RNU1-43P-201ENST00000365052 SHROOM4Q9ULL8 1493 aa10.36□□□□□ -0.75
RNU1-43P-201ENST00000365052 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
RNU1-43P-201ENST00000365052 EIF4G1Q04637 1599 aaKnown RBP10.33□□□□□ -0.76
RNU1-43P-201ENST00000365052 CECR2Q9BXF3 1484 aa10.32□□□□□ -0.76
RNU1-43P-201ENST00000365052 ATAD2BQ9ULI0 1458 aa10.04□□□□□ -0.8
RNU1-43P-201ENST00000365052 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
RNU1-43P-201ENST00000365052 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
RNU1-43P-201ENST00000365052 BAZ1AQ9NRL2 1556 aaPredicted RBP9.99□□□□□ -0.81
RNU1-43P-201ENST00000365052 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
RNU1-43P-201ENST00000365052 MROH2BQ7Z745 1585 aa9.98□□□□□ -0.81
RNU1-43P-201ENST00000365052 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
RNU1-43P-201ENST00000365052 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
RNU1-43P-201ENST00000365052 NESP48681 1621 aa9.92□□□□□ -0.82
RNU1-43P-201ENST00000365052 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
RNU1-43P-201ENST00000365052 WIZO95785 1651 aa9.88□□□□□ -0.83
RNU1-43P-201ENST00000365052 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
RNU1-43P-201ENST00000365052 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
RNU1-43P-201ENST00000365052 CUX2O14529 1486 aa9.79□□□□□ -0.84
RNU1-43P-201ENST00000365052 LAMC3Q9Y6N6 1575 aa9.78□□□□□ -0.84
RNU1-43P-201ENST00000365052 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.84
RNU1-43P-201ENST00000365052 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
RNU1-43P-201ENST00000365052 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
RNU1-43P-201ENST00000365052 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
RNU1-43P-201ENST00000365052 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
RNU1-43P-201ENST00000365052 TOP2AP11388 1531 aaKnown RBP9.7□□□□□ -0.86
RNU1-43P-201ENST00000365052 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
RNU1-43P-201ENST00000365052 FANCD2Q9BXW9 1451 aa9.66□□□□□ -0.86
RNU1-43P-201ENST00000365052 CFTRP13569 1480 aa9.65□□□□□ -0.87
RNU1-43P-201ENST00000365052 MRC2Q9UBG0 1479 aa9.65□□□□□ -0.87
RNU1-43P-201ENST00000365052 CEP164Q9UPV0 1460 aa9.65□□□□□ -0.87
RNU1-43P-201ENST00000365052 SUPT5HO00267 1087 aaKnown RBP9.62□□□□□ -0.87
RNU1-43P-201ENST00000365052 WDR62O43379 1518 aa9.58□□□□□ -0.88
RNU1-43P-201ENST00000365052 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
RNU1-43P-201ENST00000365052 PRDM2Q13029 1718 aa9.51□□□□□ -0.89
RNU1-43P-201ENST00000365052 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
RNU1-43P-201ENST00000365052 OSCARQ8IYS5 282 aa9.47□□□□□ -0.89
RNU1-43P-201ENST00000365052 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
RNU1-43P-201ENST00000365052 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.9
RNU1-43P-201ENST00000365052 IFT140Q96RY7 1462 aa9.44□□□□□ -0.9
RNU1-43P-201ENST00000365052 ABCC8Q09428 1581 aa9.43□□□□□ -0.9
RNU1-43P-201ENST00000365052 DNMBPQ6XZF7 1577 aa9.42□□□□□ -0.9
RNU1-43P-201ENST00000365052 FBLN2P98095 1184 aa9.42□□□□□ -0.9
RNU1-43P-201ENST00000365052 AQRO60306 1485 aaKnown RBP eCLIP9.41□□□□□ -0.9
RNU1-43P-201ENST00000365052 RAD54L2Q9Y4B4 1467 aa9.4□□□□□ -0.9
RNU1-43P-201ENST00000365052 SOGA1O94964 1423 aa9.39□□□□□ -0.91
RNU1-43P-201ENST00000365052 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
RNU1-43P-201ENST00000365052 POLA1P09884 1462 aaPredicted RBP9.39□□□□□ -0.91
RNU1-43P-201ENST00000365052 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
RNU1-43P-201ENST00000365052 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
RNU1-43P-201ENST00000365052 CUX1P39880 1505 aa9.36□□□□□ -0.91
RNU1-43P-201ENST00000365052 FGD5Q6ZNL6 1462 aa9.35□□□□□ -0.91
RNU1-43P-201ENST00000365052 CHMP7Q8WUX9 453 aaPredicted RBP9.31□□□□□ -0.92
RNU1-43P-201ENST00000365052 CHD1O14646 1710 aa9.29□□□□□ -0.92
RNU1-43P-201ENST00000365052 CYB5RLQ6IPT4 315 aa9.29□□□□□ -0.92
RNU1-43P-201ENST00000365052 SNAPC4Q5SXM2 1469 aa9.28□□□□□ -0.92
RNU1-43P-201ENST00000365052 RIMBP3CA6NJZ7 1639 aa9.27□□□□□ -0.92
RNU1-43P-201ENST00000365052 RIMBP3BA6NNM3 1639 aa9.27□□□□□ -0.92
RNU1-43P-201ENST00000365052 RIMBP3Q9UFD9 1639 aa9.27□□□□□ -0.92
RNU1-43P-201ENST00000365052 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
RNU1-43P-201ENST00000365052 GRIN2BQ13224 1484 aa9.25□□□□□ -0.93
RNU1-43P-201ENST00000365052 GAPVD1Q14C86 1478 aa9.25□□□□□ -0.93
RNU1-43P-201ENST00000365052 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
RNU1-43P-201ENST00000365052 ABCA10Q8WWZ4 1543 aa9.22□□□□□ -0.93
RNU1-43P-201ENST00000365052 SYNJ1O43426 1573 aa9.22□□□□□ -0.93
RNU1-43P-201ENST00000365052 WDR97A6NE52 1622 aa9.22□□□□□ -0.93
RNU1-43P-201ENST00000365052 PBRM1Q86U86 1689 aa9.21□□□□□ -0.93
RNU1-43P-201ENST00000365052 MAGI1Q96QZ7 1491 aaPredicted RBP9.21□□□□□ -0.94
RNU1-43P-201ENST00000365052 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
RNU1-43P-201ENST00000365052 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
RNU1-43P-201ENST00000365052 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
RNU1-43P-201ENST00000365052 TRHP20396 242 aaPredicted RBP9.18□□□□□ -0.94
RNU1-43P-201ENST00000365052 ABCA5Q8WWZ7 1642 aa9.17□□□□□ -0.94
RNU1-43P-201ENST00000365052 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
RNU1-43P-201ENST00000365052 CLASP1Q7Z460 1538 aa9.15□□□□□ -0.95
RNU1-43P-201ENST00000365052 FHAD1B1AJZ9 1412 aa9.13□□□□□ -0.95
RNU1-43P-201ENST00000365052 GRIN2AQ12879 1464 aa9.12□□□□□ -0.95
RNU1-43P-201ENST00000365052 ADAMTS12P58397 1594 aa9.1□□□□□ -0.95
RNU1-43P-201ENST00000365052 CEP170Q5SW79 1584 aa9.09□□□□□ -0.95
RNU1-43P-201ENST00000365052 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
RNU1-43P-201ENST00000365052 ERICH3Q5RHP9 1530 aa9.09□□□□□ -0.95
RNU1-43P-201ENST00000365052 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
RNU1-43P-201ENST00000365052 IGF1RP08069 1367 aa9.08□□□□□ -0.96
RNU1-43P-201ENST00000365052 TTBK1Q5TCY1 1321 aaPredicted RBP9.06□□□□□ -0.96
RNU1-43P-201ENST00000365052 NUP160Q12769 1436 aa9.06□□□□□ -0.96
RNU1-43P-201ENST00000365052 KIF27Q86VH2 1401 aa9.06□□□□□ -0.96
RNU1-43P-201ENST00000365052 PRG4Q92954 1404 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms