RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 DCAF8L2P0C7V8 631 aa8.47□□□□□ -1.05
TTC3-204ENST00000399017 FAM9AQ8IZU1 332 aaPredicted RBP8.46□□□□□ -1.05
TTC3-204ENST00000399017 PELP1Q8IZL8 1130 aaKnown RBP8.03□□□□□ -1.12
TTC3-204ENST00000399017 APLP2Q06481 763 aa7.92□□□□□ -1.14
TTC3-204ENST00000399017 NISCHQ9Y2I1 1504 aa7.74□□□□□ -1.17
TTC3-204ENST00000399017 CCER1Q8TC90 406 aaPredicted RBP7.7□□□□□ -1.18
TTC3-204ENST00000399017 MYT1LQ9UL68 1186 aa7.61□□□□□ -1.19
TTC3-204ENST00000399017 ATP1B4Q9UN42 357 aaPredicted RBP7.53□□□□□ -1.2
TTC3-204ENST00000399017 SUPT5HO00267 1087 aaKnown RBP7.5□□□□□ -1.21
TTC3-204ENST00000399017 ERICH6Q7L0X2 663 aa7.49□□□□□ -1.21
TTC3-204ENST00000399017 YTHDC1Q96MU7 727 aaKnown RBP7.44□□□□□ -1.22
TTC3-204ENST00000399017 CHIC1Q5VXU3 224 aa7.41□□□□□ -1.22
TTC3-204ENST00000399017 DAXXQ9UER7 740 aaPredicted RBP7.37□□□□□ -1.23
TTC3-204ENST00000399017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.35□□□□□ -1.23
TTC3-204ENST00000399017 HNRNPUL2Q1KMD3 747 aaKnown RBP7.35□□□□□ -1.23
TTC3-204ENST00000399017 EHMT2Q96KQ7 1210 aa7.31□□□□□ -1.24
TTC3-204ENST00000399017 NEFLP07196 543 aa7.31□□□□□ -1.24
TTC3-204ENST00000399017 NEFMP07197 916 aa7.31□□□□□ -1.24
TTC3-204ENST00000399017 SLC4A1APQ9BWU0 796 aaKnown RBP7.3□□□□□ -1.24
TTC3-204ENST00000399017 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
TTC3-204ENST00000399017 UBTFP17480 764 aaKnown RBP7.24□□□□□ -1.25
TTC3-204ENST00000399017 ZBTB47Q9UFB7 747 aaPredicted RBP7.24□□□□□ -1.25
TTC3-204ENST00000399017 SHROOM4Q9ULL8 1493 aa7.24□□□□□ -1.25
TTC3-204ENST00000399017 RANGAP1P46060 587 aaPredicted RBP7.22□□□□□ -1.25
TTC3-204ENST00000399017 MYT1Q01538 1121 aa7.22□□□□□ -1.25
TTC3-204ENST00000399017 BCANQ96GW7 911 aa7.21□□□□□ -1.26
TTC3-204ENST00000399017 CENPBP07199 599 aaPredicted RBP7.21□□□□□ -1.26
TTC3-204ENST00000399017 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
TTC3-204ENST00000399017 SLC24A1O60721 1099 aa7.18□□□□□ -1.26
TTC3-204ENST00000399017 AEBP2Q6ZN18 517 aaPredicted RBP7.18□□□□□ -1.26
TTC3-204ENST00000399017 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
TTC3-204ENST00000399017 TRIM41Q8WV44 630 aa7.14□□□□□ -1.27
TTC3-204ENST00000399017 PLPPR3Q6T4P5 718 aa7.13□□□□□ -1.27
TTC3-204ENST00000399017 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
TTC3-204ENST00000399017 CLSPNQ9HAW4 1339 aa7.1□□□□□ -1.27
TTC3-204ENST00000399017 DCAF8L1A6NGE4 600 aa7.1□□□□□ -1.27
TTC3-204ENST00000399017 NPM2Q86SE8 214 aaKnown RBP7.09□□□□□ -1.27
TTC3-204ENST00000399017 KRI1Q8N9T8 703 aaKnown RBP7.08□□□□□ -1.28
TTC3-204ENST00000399017 POLR3GLQ9BT43 218 aa7.07□□□□□ -1.28
TTC3-204ENST00000399017 ZNF316A6NFI3 1004 aaPredicted RBP7.07□□□□□ -1.28
TTC3-204ENST00000399017 CDK11BP21127 795 aaKnown RBP7.06□□□□□ -1.28
TTC3-204ENST00000399017 CDK11AQ9UQ88 783 aaPredicted RBP7.06□□□□□ -1.28
TTC3-204ENST00000399017 PCGF6Q9BYE7 350 aa7.04□□□□□ -1.28
TTC3-204ENST00000399017 STAG3Q9UJ98 1225 aa7.03□□□□□ -1.28
TTC3-204ENST00000399017 A0A0G2JS52 829 aa7.03□□□□□ -1.28
TTC3-204ENST00000399017 KAT6BQ8WYB5 2073 aa7.02□□□□□ -1.29
TTC3-204ENST00000399017 FBLN2P98095 1184 aa7□□□□□ -1.29
TTC3-204ENST00000399017 SCAF1Q9H7N4 1312 aaKnown RBP7□□□□□ -1.29
TTC3-204ENST00000399017 HAP1P54257 671 aaPredicted RBP6.92□□□□□ -1.3
TTC3-204ENST00000399017 NCBP3Q53F19 620 aaKnown RBP6.9□□□□□ -1.3
TTC3-204ENST00000399017 PHF23Q9BUL5 403 aaPredicted RBP6.9□□□□□ -1.31
TTC3-204ENST00000399017 CANXP27824 592 aaKnown RBP6.9□□□□□ -1.31
TTC3-204ENST00000399017 ITGAEP38570 1179 aa6.89□□□□□ -1.31
TTC3-204ENST00000399017 FOXD1Q16676 465 aa6.88□□□□□ -1.31
TTC3-204ENST00000399017 RTL5Q5HYW3 569 aaPredicted RBP6.88□□□□□ -1.31
TTC3-204ENST00000399017 ANP32BQ92688 251 aaKnown RBP6.88□□□□□ -1.31
TTC3-204ENST00000399017 NPHP1O15259 732 aa6.87□□□□□ -1.31
TTC3-204ENST00000399017 TRIM52Q96A61 297 aa6.87□□□□□ -1.31
TTC3-204ENST00000399017 C14orf37Q86TY3 774 aa6.86□□□□□ -1.31
TTC3-204ENST00000399017 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.31
TTC3-204ENST00000399017 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.326e-6■■■■■ 27.4
TTC3-204ENST00000399017 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
TTC3-204ENST00000399017 FAM50AQ14320 339 aaKnown RBP6.82□□□□□ -1.32
TTC3-204ENST00000399017 SENP3Q9H4L4 574 aaPredicted RBP6.81□□□□□ -1.32
TTC3-204ENST00000399017 HSP90AA1P07900 732 aaKnown RBP6.8□□□□□ -1.32
TTC3-204ENST00000399017 CNGB1Q14028 1251 aaPredicted RBP6.79□□□□□ -1.32
TTC3-204ENST00000399017 UPF2Q9HAU5 1272 aaKnown RBP6.79□□□□□ -1.32
TTC3-204ENST00000399017 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
TTC3-204ENST00000399017 ARID4BQ4LE39 1312 aaPredicted RBP6.78□□□□□ -1.32
TTC3-204ENST00000399017 EIF5BO60841 1220 aaKnown RBP6.77□□□□□ -1.33
TTC3-204ENST00000399017 TULP1O00294 542 aaPredicted RBP6.76□□□□□ -1.33
TTC3-204ENST00000399017 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
TTC3-204ENST00000399017 GOLGA2Q08379 1002 aa6.75□□□□□ -1.33
TTC3-204ENST00000399017 CHGAP10645 457 aaKnown RBP6.75□□□□□ -1.33
TTC3-204ENST00000399017 HDGFP51858 240 aaKnown RBP6.74□□□□□ -1.33
TTC3-204ENST00000399017 ABCC9O60706 1549 aa6.74□□□□□ -1.33
TTC3-204ENST00000399017 BCL11AQ9H165 835 aa6.74□□□□□ -1.33
TTC3-204ENST00000399017 PPP1R15AO75807 674 aaPredicted RBP6.73□□□□□ -1.33
TTC3-204ENST00000399017 MYH16Q9H6N6 1097 aa6.73□□□□□ -1.33
TTC3-204ENST00000399017 ANP32EQ9BTT0 268 aa6.72□□□□□ -1.33
TTC3-204ENST00000399017 CSRNP3Q8WYN3 585 aa6.72□□□□□ -1.33
TTC3-204ENST00000399017 CHMP7Q8WUX9 453 aaPredicted RBP6.71□□□□□ -1.33
TTC3-204ENST00000399017 PLEKHG5O94827 1062 aa6.71□□□□□ -1.34
TTC3-204ENST00000399017 ZNF326Q5BKZ1 582 aaKnown RBP6.71□□□□□ -1.34
TTC3-204ENST00000399017 FKBP8Q14318 412 aa6.7□□□□□ -1.34
TTC3-204ENST00000399017 ZRSR1Q15695 479 aaKnown RBP6.7□□□□□ -1.34
TTC3-204ENST00000399017 ANP32CO43423 234 aa6.69□□□□□ -1.34
TTC3-204ENST00000399017 PRM3Q9NNZ6 103 aa6.68□□□□□ -1.34
TTC3-204ENST00000399017 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.68□□□□□ -1.34
TTC3-204ENST00000399017 ARXQ96QS3 562 aa6.68□□□□□ -1.34
TTC3-204ENST00000399017 MAP3K9P80192 1104 aa6.68□□□□□ -1.34
TTC3-204ENST00000399017 ZNF777Q9ULD5 760 aaPredicted RBP6.68□□□□□ -1.34
TTC3-204ENST00000399017 TSPY4P0CV99 314 aa6.67□□□□□ -1.34
TTC3-204ENST00000399017 TSPY10P0CW01 314 aa6.67□□□□□ -1.34
TTC3-204ENST00000399017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.66□□□□□ -1.344e-7■■□□□ 14.3
TTC3-204ENST00000399017 ERCC6Q03468 1493 aa6.66□□□□□ -1.34
TTC3-204ENST00000399017 TRIM26Q12899 539 aaPredicted RBP6.64□□□□□ -1.35
TTC3-204ENST00000399017 L1TD1Q5T7N2 865 aaKnown RBP6.63□□□□□ -1.35
TTC3-204ENST00000399017 PABPN1Q86U42 306 aaKnown RBP eCLIP6.63□□□□□ -1.35
TTC3-204ENST00000399017 ZBTB7CA1YPR0 619 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms