RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
GYPB-202ENST00000502664 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
GYPB-202ENST00000502664 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
GYPB-202ENST00000502664 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
GYPB-202ENST00000502664 FOXD1Q16676 465 aa15.02■□□□□ -0
GYPB-202ENST00000502664 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
GYPB-202ENST00000502664 MSH5O43196 834 aa14.17□□□□□ -0.14
GYPB-202ENST00000502664 PIAS4Q8N2W9 510 aaPredicted RBP13.9□□□□□ -0.18
GYPB-202ENST00000502664 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
GYPB-202ENST00000502664 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
GYPB-202ENST00000502664 ADRA2BP18089 450 aa13.66□□□□□ -0.22
GYPB-202ENST00000502664 NISCHQ9Y2I1 1504 aa13.19□□□□□ -0.3
GYPB-202ENST00000502664 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
GYPB-202ENST00000502664 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
GYPB-202ENST00000502664 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
GYPB-202ENST00000502664 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
GYPB-202ENST00000502664 ABCC9O60706 1549 aa12.29□□□□□ -0.44
GYPB-202ENST00000502664 DCAF8L1A6NGE4 600 aa12.13□□□□□ -0.47
GYPB-202ENST00000502664 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
GYPB-202ENST00000502664 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
GYPB-202ENST00000502664 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
GYPB-202ENST00000502664 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
GYPB-202ENST00000502664 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
GYPB-202ENST00000502664 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
GYPB-202ENST00000502664 RNF216Q9NWF9 866 aaPredicted RBP11.82□□□□□ -0.52
GYPB-202ENST00000502664 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
GYPB-202ENST00000502664 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
GYPB-202ENST00000502664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
GYPB-202ENST00000502664 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
GYPB-202ENST00000502664 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
GYPB-202ENST00000502664 POTEHQ6S545 545 aa11.32□□□□□ -0.6
GYPB-202ENST00000502664 NACADO15069 1562 aa11.32□□□□□ -0.6
GYPB-202ENST00000502664 DCAF8L2P0C7V8 631 aa11.3□□□□□ -0.6
GYPB-202ENST00000502664 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
GYPB-202ENST00000502664 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
GYPB-202ENST00000502664 NPM3O75607 178 aaKnown RBP11.21□□□□□ -0.61
GYPB-202ENST00000502664 DSG3P32926 999 aa11.18□□□□□ -0.62
GYPB-202ENST00000502664 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
GYPB-202ENST00000502664 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
GYPB-202ENST00000502664 CAPN15O75808 1086 aa11.12□□□□□ -0.63
GYPB-202ENST00000502664 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
GYPB-202ENST00000502664 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
GYPB-202ENST00000502664 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
GYPB-202ENST00000502664 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
GYPB-202ENST00000502664 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
GYPB-202ENST00000502664 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
GYPB-202ENST00000502664 SHROOM4Q9ULL8 1493 aa10.9□□□□□ -0.66
GYPB-202ENST00000502664 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
GYPB-202ENST00000502664 ABCB7O75027 752 aa10.84□□□□□ -0.67
GYPB-202ENST00000502664 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
GYPB-202ENST00000502664 SLC4A2P04920 1241 aa10.83□□□□□ -0.68
GYPB-202ENST00000502664 DCAF1Q9Y4B6 1507 aa10.81□□□□□ -0.68
GYPB-202ENST00000502664 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
GYPB-202ENST00000502664 APLP2Q06481 763 aa10.76□□□□□ -0.69
GYPB-202ENST00000502664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
GYPB-202ENST00000502664 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
GYPB-202ENST00000502664 KCNA4P22459 653 aa10.63□□□□□ -0.71
GYPB-202ENST00000502664 RBM42Q9BTD8 480 aaKnown RBP10.63□□□□□ -0.71
GYPB-202ENST00000502664 CUX2O14529 1486 aa10.61□□□□□ -0.71
GYPB-202ENST00000502664 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
GYPB-202ENST00000502664 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
GYPB-202ENST00000502664 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
GYPB-202ENST00000502664 NESP48681 1621 aa10.5□□□□□ -0.73
GYPB-202ENST00000502664 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
GYPB-202ENST00000502664 POLA2Q14181 598 aa10.47□□□□□ -0.73
GYPB-202ENST00000502664 ATAD2BQ9ULI0 1458 aa10.44□□□□□ -0.74
GYPB-202ENST00000502664 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
GYPB-202ENST00000502664 SP7Q8TDD2 431 aaPredicted RBP10.42□□□□□ -0.74
GYPB-202ENST00000502664 THOC2Q8NI27 1593 aaKnown RBP10.4□□□□□ -0.74
GYPB-202ENST00000502664 HMGXB3Q12766 1538 aa10.36□□□□□ -0.75
GYPB-202ENST00000502664 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
GYPB-202ENST00000502664 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
GYPB-202ENST00000502664 SMARCA2P51531 1590 aa10.33□□□□□ -0.76
GYPB-202ENST00000502664 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
GYPB-202ENST00000502664 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
GYPB-202ENST00000502664 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
GYPB-202ENST00000502664 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.76
GYPB-202ENST00000502664 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
GYPB-202ENST00000502664 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
GYPB-202ENST00000502664 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
GYPB-202ENST00000502664 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
GYPB-202ENST00000502664 PDS5BQ9NTI5 1447 aa10.21□□□□□ -0.78
GYPB-202ENST00000502664 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.78
GYPB-202ENST00000502664 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
GYPB-202ENST00000502664 HAX1O00165 279 aa10.18□□□□□ -0.78
GYPB-202ENST00000502664 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
GYPB-202ENST00000502664 MRC2Q9UBG0 1479 aa10.17□□□□□ -0.78
GYPB-202ENST00000502664 WDR62O43379 1518 aa10.17□□□□□ -0.78
GYPB-202ENST00000502664 CADPSQ9ULU8 1353 aa10.16□□□□□ -0.78
GYPB-202ENST00000502664 OSCARQ8IYS5 282 aa10.15□□□□□ -0.78
GYPB-202ENST00000502664 FXR2P51116 673 aaKnown RBP eCLIP10.14□□□□□ -0.79
GYPB-202ENST00000502664 PITPNM1O00562 1244 aa10.13□□□□□ -0.79
GYPB-202ENST00000502664 WIZO95785 1651 aa10.07□□□□□ -0.8
GYPB-202ENST00000502664 CEP164Q9UPV0 1460 aa10.07□□□□□ -0.8
GYPB-202ENST00000502664 EVX2Q03828 476 aa10.07□□□□□ -0.8
GYPB-202ENST00000502664 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
GYPB-202ENST00000502664 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
GYPB-202ENST00000502664 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
GYPB-202ENST00000502664 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
GYPB-202ENST00000502664 URB2Q14146 1524 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms