Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC093323.1-202ENST00000635031 2045 ntBASIC27.89■■■□□ 2.05
KCNF1Q9H3M0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
KCNF1Q9H3M0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
KCNF1Q9H3M0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
KCNF1Q9H3M0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.88■■■□□ 2.05
KCNF1Q9H3M0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
KCNF1Q9H3M0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
KCNF1Q9H3M0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
KCNF1Q9H3M0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.86■■■□□ 2.05
KCNF1Q9H3M0 AC145676.1-201ENST00000514988 2004 ntBASIC27.85■■■□□ 2.05
KCNF1Q9H3M0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
KCNF1Q9H3M0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNF1Q9H3M0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNF1Q9H3M0 AC100797.4-201ENST00000631653 1827 ntBASIC27.83■■■□□ 2.05
KCNF1Q9H3M0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
KCNF1Q9H3M0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.82■■■□□ 2.04
KCNF1Q9H3M0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.81■■■□□ 2.04
KCNF1Q9H3M0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
KCNF1Q9H3M0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
KCNF1Q9H3M0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KCNF1Q9H3M0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.79■■■□□ 2.04
KCNF1Q9H3M0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNF1Q9H3M0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KCNF1Q9H3M0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.78■■■□□ 2.04
KCNF1Q9H3M0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KCNF1Q9H3M0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KCNF1Q9H3M0 AC127502.1-201ENST00000399971 1502 ntBASIC27.77■■■□□ 2.04
KCNF1Q9H3M0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
KCNF1Q9H3M0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
KCNF1Q9H3M0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.04
KCNF1Q9H3M0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.76■■■□□ 2.04
KCNF1Q9H3M0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
KCNF1Q9H3M0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
KCNF1Q9H3M0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
KCNF1Q9H3M0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.76■■■□□ 2.03
KCNF1Q9H3M0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
KCNF1Q9H3M0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.75■■■□□ 2.03
KCNF1Q9H3M0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
KCNF1Q9H3M0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.74■■■□□ 2.03
KCNF1Q9H3M0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
KCNF1Q9H3M0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
KCNF1Q9H3M0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
KCNF1Q9H3M0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
KCNF1Q9H3M0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
KCNF1Q9H3M0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.73■■■□□ 2.03
KCNF1Q9H3M0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KCNF1Q9H3M0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.72■■■□□ 2.03
KCNF1Q9H3M0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
KCNF1Q9H3M0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
KCNF1Q9H3M0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
KCNF1Q9H3M0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
KCNF1Q9H3M0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
KCNF1Q9H3M0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
KCNF1Q9H3M0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.71■■■□□ 2.03
KCNF1Q9H3M0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNF1Q9H3M0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.7■■■□□ 2.02
KCNF1Q9H3M0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNF1Q9H3M0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
KCNF1Q9H3M0 AL133380.1-201ENST00000506013 324 ntBASIC27.69■■■□□ 2.02
KCNF1Q9H3M0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
KCNF1Q9H3M0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.68■■■□□ 2.02
KCNF1Q9H3M0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNF1Q9H3M0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNF1Q9H3M0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNF1Q9H3M0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KCNF1Q9H3M0 AP002414.2-202ENST00000590929 1450 ntBASIC27.66■■■□□ 2.02
KCNF1Q9H3M0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
KCNF1Q9H3M0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
KCNF1Q9H3M0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KCNF1Q9H3M0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.65■■■□□ 2.02
KCNF1Q9H3M0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
KCNF1Q9H3M0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KCNF1Q9H3M0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KCNF1Q9H3M0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KCNF1Q9H3M0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KCNF1Q9H3M0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KCNF1Q9H3M0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
KCNF1Q9H3M0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
KCNF1Q9H3M0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
KCNF1Q9H3M0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
KCNF1Q9H3M0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
KCNF1Q9H3M0 DUSP8P4-201ENST00000399538 1761 ntBASIC27.61■■■□□ 2.01
KCNF1Q9H3M0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
KCNF1Q9H3M0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
KCNF1Q9H3M0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.6■■■□□ 2.01
KCNF1Q9H3M0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.59■■■□□ 2.01
KCNF1Q9H3M0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
KCNF1Q9H3M0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.59■■■□□ 2.01
KCNF1Q9H3M0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
KCNF1Q9H3M0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
KCNF1Q9H3M0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
KCNF1Q9H3M0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms