Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ALX4Q9H161 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALX4Q9H161 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.38■■□□□ 1.01
ALX4Q9H161 AC136428.2-201ENST00000563187 214 ntBASIC21.38■■□□□ 1.01
ALX4Q9H161 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.38■■□□□ 1.01
ALX4Q9H161 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALX4Q9H161 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ALX4Q9H161 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
ALX4Q9H161 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ALX4Q9H161 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ALX4Q9H161 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALX4Q9H161 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ALX4Q9H161 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALX4Q9H161 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.37■■□□□ 1.01
ALX4Q9H161 AC145676.1-201ENST00000514988 2004 ntBASIC21.37■■□□□ 1.01
ALX4Q9H161 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
ALX4Q9H161 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.37■■□□□ 1.01
ALX4Q9H161 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ALX4Q9H161 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ALX4Q9H161 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ALX4Q9H161 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.35■■□□□ 1.01
ALX4Q9H161 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ALX4Q9H161 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ALX4Q9H161 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.34■■□□□ 1.01
ALX4Q9H161 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.34■■□□□ 1.01
ALX4Q9H161 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALX4Q9H161 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ALX4Q9H161 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.33■■□□□ 1.01
ALX4Q9H161 WASH5P-204ENST00000632292 975 ntBASIC21.33■■□□□ 1.01
ALX4Q9H161 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.33■■□□□ 1
ALX4Q9H161 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
ALX4Q9H161 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
ALX4Q9H161 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ALX4Q9H161 AL133380.1-201ENST00000506013 324 ntBASIC21.32■■□□□ 1
ALX4Q9H161 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ALX4Q9H161 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.32■■□□□ 1
ALX4Q9H161 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.31■■□□□ 1
ALX4Q9H161 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.31■■□□□ 1
ALX4Q9H161 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.3■■□□□ 1
ALX4Q9H161 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ALX4Q9H161 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ALX4Q9H161 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALX4Q9H161 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ALX4Q9H161 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALX4Q9H161 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALX4Q9H161 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALX4Q9H161 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.29■■□□□ 1
ALX4Q9H161 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.29■■□□□ 1
ALX4Q9H161 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALX4Q9H161 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.28■■□□□ 1
ALX4Q9H161 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.28■■□□□ 1
ALX4Q9H161 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.28■■□□□ 1
ALX4Q9H161 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALX4Q9H161 AC093323.1-202ENST00000635031 2045 ntBASIC21.28■■□□□ 1
ALX4Q9H161 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALX4Q9H161 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ALX4Q9H161 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ALX4Q9H161 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALX4Q9H161 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.27■■□□□ 1
ALX4Q9H161 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ALX4Q9H161 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALX4Q9H161 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ALX4Q9H161 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ALX4Q9H161 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ALX4Q9H161 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ALX4Q9H161 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.25■□□□□ 0.99
ALX4Q9H161 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALX4Q9H161 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ALX4Q9H161 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALX4Q9H161 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.24■□□□□ 0.99
ALX4Q9H161 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALX4Q9H161 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.23■□□□□ 0.99
ALX4Q9H161 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ALX4Q9H161 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALX4Q9H161 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALX4Q9H161 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ALX4Q9H161 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALX4Q9H161 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ALX4Q9H161 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ALX4Q9H161 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.22■□□□□ 0.99
ALX4Q9H161 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.21■□□□□ 0.99
ALX4Q9H161 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALX4Q9H161 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.21■□□□□ 0.99
ALX4Q9H161 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.21■□□□□ 0.99
ALX4Q9H161 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ALX4Q9H161 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALX4Q9H161 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALX4Q9H161 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ALX4Q9H161 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALX4Q9H161 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALX4Q9H161 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.19■□□□□ 0.98
ALX4Q9H161 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALX4Q9H161 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ALX4Q9H161 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.19■□□□□ 0.98
ALX4Q9H161 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALX4Q9H161 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ALX4Q9H161 CAHM-201ENST00000604200 896 ntBASIC21.19■□□□□ 0.98
ALX4Q9H161 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.19■□□□□ 0.98
ALX4Q9H161 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ALX4Q9H161 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms