Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3L1Q8WWY6 WASH5P-204ENST00000632292 975 ntBASIC19.97■□□□□ 0.79
MBD3L1Q8WWY6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3L1Q8WWY6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3L1Q8WWY6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3L1Q8WWY6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.96■□□□□ 0.79
MBD3L1Q8WWY6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3L1Q8WWY6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
MBD3L1Q8WWY6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD3L1Q8WWY6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3L1Q8WWY6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MBD3L1Q8WWY6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L1Q8WWY6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L1Q8WWY6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.94■□□□□ 0.78
MBD3L1Q8WWY6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3L1Q8WWY6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.93■□□□□ 0.78
MBD3L1Q8WWY6 AC006077.2-201ENST00000623591 457 ntBASIC19.93■□□□□ 0.78
MBD3L1Q8WWY6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
MBD3L1Q8WWY6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD3L1Q8WWY6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MBD3L1Q8WWY6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3L1Q8WWY6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
MBD3L1Q8WWY6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3L1Q8WWY6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.91■□□□□ 0.78
MBD3L1Q8WWY6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3L1Q8WWY6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MBD3L1Q8WWY6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3L1Q8WWY6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L1Q8WWY6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L1Q8WWY6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L1Q8WWY6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L1Q8WWY6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L1Q8WWY6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L1Q8WWY6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L1Q8WWY6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L1Q8WWY6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L1Q8WWY6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L1Q8WWY6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 DYNLL1-208ENST00000550178 581 ntBASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L1Q8WWY6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD3L1Q8WWY6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L1Q8WWY6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L1Q8WWY6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3L1Q8WWY6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MBD3L1Q8WWY6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 DUSP8P4-201ENST00000399538 1761 ntBASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD3L1Q8WWY6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3L1Q8WWY6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3L1Q8WWY6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
MBD3L1Q8WWY6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3L1Q8WWY6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MBD3L1Q8WWY6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3L1Q8WWY6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.82■□□□□ 0.76
MBD3L1Q8WWY6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L1Q8WWY6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L1Q8WWY6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L1Q8WWY6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3L1Q8WWY6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 AP002414.2-202ENST00000590929 1450 ntBASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3L1Q8WWY6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L1Q8WWY6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MBD3L1Q8WWY6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD3L1Q8WWY6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L1Q8WWY6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L1Q8WWY6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3L1Q8WWY6 AC100797.4-201ENST00000631653 1827 ntBASIC19.78■□□□□ 0.76
MBD3L1Q8WWY6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L1Q8WWY6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L1Q8WWY6 AL031258.1-201ENST00000623562 325 ntBASIC19.77■□□□□ 0.76
MBD3L1Q8WWY6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L1Q8WWY6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L1Q8WWY6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3L1Q8WWY6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.77■□□□□ 0.75
MBD3L1Q8WWY6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3L1Q8WWY6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3L1Q8WWY6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.76■□□□□ 0.75
MBD3L1Q8WWY6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms