Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCARB1Q8WTV0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCARB1Q8WTV0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.1■□□□□ 0.97
SCARB1Q8WTV0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SCARB1Q8WTV0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.1■□□□□ 0.97
SCARB1Q8WTV0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SCARB1Q8WTV0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCARB1Q8WTV0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCARB1Q8WTV0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCARB1Q8WTV0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCARB1Q8WTV0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCARB1Q8WTV0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.09■□□□□ 0.97
SCARB1Q8WTV0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCARB1Q8WTV0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.08■□□□□ 0.96
SCARB1Q8WTV0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCARB1Q8WTV0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCARB1Q8WTV0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SCARB1Q8WTV0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCARB1Q8WTV0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCARB1Q8WTV0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCARB1Q8WTV0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SCARB1Q8WTV0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCARB1Q8WTV0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SCARB1Q8WTV0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCARB1Q8WTV0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCARB1Q8WTV0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SCARB1Q8WTV0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCARB1Q8WTV0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SCARB1Q8WTV0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCARB1Q8WTV0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCARB1Q8WTV0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.02■□□□□ 0.96
SCARB1Q8WTV0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCARB1Q8WTV0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCARB1Q8WTV0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCARB1Q8WTV0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.01■□□□□ 0.95
SCARB1Q8WTV0 AL133380.1-201ENST00000506013 324 ntBASIC21.01■□□□□ 0.95
SCARB1Q8WTV0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCARB1Q8WTV0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCARB1Q8WTV0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCARB1Q8WTV0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCARB1Q8WTV0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCARB1Q8WTV0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCARB1Q8WTV0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCARB1Q8WTV0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SCARB1Q8WTV0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCARB1Q8WTV0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCARB1Q8WTV0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCARB1Q8WTV0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCARB1Q8WTV0 WASH5P-204ENST00000632292 975 ntBASIC20.97■□□□□ 0.95
SCARB1Q8WTV0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCARB1Q8WTV0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCARB1Q8WTV0 AC145676.1-201ENST00000514988 2004 ntBASIC20.97■□□□□ 0.95
SCARB1Q8WTV0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.96■□□□□ 0.95
SCARB1Q8WTV0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCARB1Q8WTV0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.95■□□□□ 0.95
SCARB1Q8WTV0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCARB1Q8WTV0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
SCARB1Q8WTV0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.94■□□□□ 0.94
SCARB1Q8WTV0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.94■□□□□ 0.94
SCARB1Q8WTV0 RARRES2P7-201ENST00000567349 469 ntBASIC20.94■□□□□ 0.94
SCARB1Q8WTV0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCARB1Q8WTV0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SCARB1Q8WTV0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCARB1Q8WTV0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCARB1Q8WTV0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCARB1Q8WTV0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.92■□□□□ 0.94
SCARB1Q8WTV0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCARB1Q8WTV0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCARB1Q8WTV0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.92■□□□□ 0.94
SCARB1Q8WTV0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCARB1Q8WTV0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCARB1Q8WTV0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCARB1Q8WTV0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCARB1Q8WTV0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCARB1Q8WTV0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCARB1Q8WTV0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCARB1Q8WTV0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCARB1Q8WTV0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCARB1Q8WTV0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCARB1Q8WTV0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms