Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SRFBP1Q8NEF9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SRFBP1Q8NEF9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
SRFBP1Q8NEF9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.21■■□□□ 1.47
SRFBP1Q8NEF9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.21■■□□□ 1.47
SRFBP1Q8NEF9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SRFBP1Q8NEF9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
SRFBP1Q8NEF9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
SRFBP1Q8NEF9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.2■■□□□ 1.46
SRFBP1Q8NEF9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.2■■□□□ 1.46
SRFBP1Q8NEF9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SRFBP1Q8NEF9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SRFBP1Q8NEF9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.19■■□□□ 1.46
SRFBP1Q8NEF9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SRFBP1Q8NEF9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.19■■□□□ 1.46
SRFBP1Q8NEF9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SRFBP1Q8NEF9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SRFBP1Q8NEF9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
SRFBP1Q8NEF9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SRFBP1Q8NEF9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.18■■□□□ 1.46
SRFBP1Q8NEF9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SRFBP1Q8NEF9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SRFBP1Q8NEF9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.17■■□□□ 1.46
SRFBP1Q8NEF9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
SRFBP1Q8NEF9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.16■■□□□ 1.46
SRFBP1Q8NEF9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.16■■□□□ 1.46
SRFBP1Q8NEF9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.16■■□□□ 1.46
SRFBP1Q8NEF9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.16■■□□□ 1.46
SRFBP1Q8NEF9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SRFBP1Q8NEF9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.15■■□□□ 1.46
SRFBP1Q8NEF9 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.15■■□□□ 1.46
SRFBP1Q8NEF9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SRFBP1Q8NEF9 AC110285.7-201ENST00000624417 1536 ntBASIC24.15■■□□□ 1.46
SRFBP1Q8NEF9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L13-201ENST00000554103 1267 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L15-201ENST00000611059 1267 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L11-201ENST00000611504 1267 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L12-201ENST00000614593 1267 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L23-201ENST00000615195 1269 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L24-201ENST00000617576 1269 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L22-201ENST00000618238 1269 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L20-201ENST00000619712 1269 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L14-201ENST00000621227 1267 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L21-201ENST00000622058 1269 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L10-201ENST00000622460 1267 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 DUX4L25-201ENST00000624915 1269 ntBASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
SRFBP1Q8NEF9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SRFBP1Q8NEF9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SRFBP1Q8NEF9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SRFBP1Q8NEF9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.12■■□□□ 1.45
SRFBP1Q8NEF9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.12■■□□□ 1.45
SRFBP1Q8NEF9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SRFBP1Q8NEF9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SRFBP1Q8NEF9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SRFBP1Q8NEF9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SRFBP1Q8NEF9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.11■■□□□ 1.45
SRFBP1Q8NEF9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
SRFBP1Q8NEF9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SRFBP1Q8NEF9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.1■■□□□ 1.45
SRFBP1Q8NEF9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SRFBP1Q8NEF9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SRFBP1Q8NEF9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.09■■□□□ 1.45
SRFBP1Q8NEF9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.09■■□□□ 1.45
SRFBP1Q8NEF9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
SRFBP1Q8NEF9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SRFBP1Q8NEF9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SRFBP1Q8NEF9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
SRFBP1Q8NEF9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
SRFBP1Q8NEF9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SRFBP1Q8NEF9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SRFBP1Q8NEF9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SRFBP1Q8NEF9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SRFBP1Q8NEF9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SRFBP1Q8NEF9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SRFBP1Q8NEF9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.06■■□□□ 1.44
SRFBP1Q8NEF9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.06■■□□□ 1.44
SRFBP1Q8NEF9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SRFBP1Q8NEF9 AC018358.1-201ENST00000631079 1402 ntBASIC24.05■■□□□ 1.44
SRFBP1Q8NEF9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.05■■□□□ 1.44
SRFBP1Q8NEF9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SRFBP1Q8NEF9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SRFBP1Q8NEF9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SRFBP1Q8NEF9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SRFBP1Q8NEF9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.04■■□□□ 1.44
SRFBP1Q8NEF9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SRFBP1Q8NEF9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.04■■□□□ 1.44
SRFBP1Q8NEF9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.04■■□□□ 1.44
SRFBP1Q8NEF9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SRFBP1Q8NEF9 BX255925.1-201ENST00000566954 1854 ntBASIC24.03■■□□□ 1.44
SRFBP1Q8NEF9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SRFBP1Q8NEF9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SRFBP1Q8NEF9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SRFBP1Q8NEF9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SRFBP1Q8NEF9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SRFBP1Q8NEF9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SRFBP1Q8NEF9 LINC01003-201ENST00000564834 1764 ntBASIC24.01■■□□□ 1.43
SRFBP1Q8NEF9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SRFBP1Q8NEF9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms