Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDRT4Q8N9R6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.65■■□□□ 1.38
CDRT4Q8N9R6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.65■■□□□ 1.38
CDRT4Q8N9R6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.65■■□□□ 1.38
CDRT4Q8N9R6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CDRT4Q8N9R6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDRT4Q8N9R6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDRT4Q8N9R6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDRT4Q8N9R6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.62■■□□□ 1.37
CDRT4Q8N9R6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDRT4Q8N9R6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDRT4Q8N9R6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDRT4Q8N9R6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDRT4Q8N9R6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.61■■□□□ 1.37
CDRT4Q8N9R6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDRT4Q8N9R6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.61■■□□□ 1.37
CDRT4Q8N9R6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDRT4Q8N9R6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
CDRT4Q8N9R6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 BX255925.1-201ENST00000566954 1854 ntBASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CDRT4Q8N9R6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDRT4Q8N9R6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDRT4Q8N9R6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.59■■□□□ 1.37
CDRT4Q8N9R6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.59■■□□□ 1.37
CDRT4Q8N9R6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDRT4Q8N9R6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDRT4Q8N9R6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.58■■□□□ 1.37
CDRT4Q8N9R6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
CDRT4Q8N9R6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDRT4Q8N9R6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDRT4Q8N9R6 LINC01003-201ENST00000564834 1764 ntBASIC23.56■■□□□ 1.36
CDRT4Q8N9R6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDRT4Q8N9R6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDRT4Q8N9R6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDRT4Q8N9R6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDRT4Q8N9R6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.55■■□□□ 1.36
CDRT4Q8N9R6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDRT4Q8N9R6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDRT4Q8N9R6 LINC01971-201ENST00000617888 1048 ntBASIC23.54■■□□□ 1.36
CDRT4Q8N9R6 AC018358.1-201ENST00000631079 1402 ntBASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 AC110285.7-201ENST00000624417 1536 ntBASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CDRT4Q8N9R6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDRT4Q8N9R6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.52■■□□□ 1.36
CDRT4Q8N9R6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDRT4Q8N9R6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.51■■□□□ 1.35
CDRT4Q8N9R6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.51■■□□□ 1.35
CDRT4Q8N9R6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDRT4Q8N9R6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDRT4Q8N9R6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDRT4Q8N9R6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CDRT4Q8N9R6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDRT4Q8N9R6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.5■■□□□ 1.35
CDRT4Q8N9R6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDRT4Q8N9R6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.48■■□□□ 1.35
CDRT4Q8N9R6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDRT4Q8N9R6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDRT4Q8N9R6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.48■■□□□ 1.35
CDRT4Q8N9R6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.47■■□□□ 1.35
CDRT4Q8N9R6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
CDRT4Q8N9R6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDRT4Q8N9R6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDRT4Q8N9R6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CDRT4Q8N9R6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CDRT4Q8N9R6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 ZNRF2P2-203ENST00000454624 420 ntBASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.46■■□□□ 1.35
CDRT4Q8N9R6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
CDRT4Q8N9R6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDRT4Q8N9R6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDRT4Q8N9R6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDRT4Q8N9R6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDRT4Q8N9R6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDRT4Q8N9R6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDRT4Q8N9R6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDRT4Q8N9R6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.43■■□□□ 1.34
CDRT4Q8N9R6 DUX4L13-201ENST00000554103 1267 ntBASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms