Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DUX4L23-201ENST00000615195 1269 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L24-201ENST00000617576 1269 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L22-201ENST00000618238 1269 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L20-201ENST00000619712 1269 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L21-201ENST00000622058 1269 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L10-201ENST00000622460 1267 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L25-201ENST00000624915 1269 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DRD5P2-201ENST00000421395 2012 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
LYSMD3Q7Z3D4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LYSMD3Q7Z3D4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LYSMD3Q7Z3D4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LYSMD3Q7Z3D4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
LYSMD3Q7Z3D4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
LYSMD3Q7Z3D4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LYSMD3Q7Z3D4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LYSMD3Q7Z3D4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LYSMD3Q7Z3D4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LYSMD3Q7Z3D4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.52■■□□□ 1.68
LYSMD3Q7Z3D4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LYSMD3Q7Z3D4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.52■■□□□ 1.68
LYSMD3Q7Z3D4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.51■■□□□ 1.67
LYSMD3Q7Z3D4 AC110285.7-201ENST00000624417 1536 ntBASIC25.51■■□□□ 1.67
LYSMD3Q7Z3D4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
LYSMD3Q7Z3D4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
LYSMD3Q7Z3D4 CR559946.2-201ENST00000623684 991 ntBASIC25.5■■□□□ 1.67
LYSMD3Q7Z3D4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LYSMD3Q7Z3D4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LYSMD3Q7Z3D4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LYSMD3Q7Z3D4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
LYSMD3Q7Z3D4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
LYSMD3Q7Z3D4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.48■■□□□ 1.67
LYSMD3Q7Z3D4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.48■■□□□ 1.67
LYSMD3Q7Z3D4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.48■■□□□ 1.67
LYSMD3Q7Z3D4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
LYSMD3Q7Z3D4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LYSMD3Q7Z3D4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.47■■□□□ 1.67
LYSMD3Q7Z3D4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.46■■□□□ 1.67
LYSMD3Q7Z3D4 MIR3648-2-201ENST00000581792 180 ntBASIC25.46■■□□□ 1.67
LYSMD3Q7Z3D4 MIR3648-1-201ENST00000615959 180 ntBASIC25.46■■□□□ 1.67
LYSMD3Q7Z3D4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.46■■□□□ 1.67
LYSMD3Q7Z3D4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
LYSMD3Q7Z3D4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
LYSMD3Q7Z3D4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
LYSMD3Q7Z3D4 HLA-V-202ENST00000446817 847 ntBASIC25.45■■□□□ 1.66
LYSMD3Q7Z3D4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LYSMD3Q7Z3D4 AP002414.2-202ENST00000590929 1450 ntBASIC25.43■■□□□ 1.66
LYSMD3Q7Z3D4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LYSMD3Q7Z3D4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.43■■□□□ 1.66
LYSMD3Q7Z3D4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.43■■□□□ 1.66
LYSMD3Q7Z3D4 AC016575.1-201ENST00000607026 382 ntBASIC25.43■■□□□ 1.66
LYSMD3Q7Z3D4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LYSMD3Q7Z3D4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.42■■□□□ 1.66
LYSMD3Q7Z3D4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LYSMD3Q7Z3D4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.42■■□□□ 1.66
LYSMD3Q7Z3D4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
LYSMD3Q7Z3D4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
LYSMD3Q7Z3D4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
LYSMD3Q7Z3D4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
LYSMD3Q7Z3D4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
LYSMD3Q7Z3D4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LYSMD3Q7Z3D4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LYSMD3Q7Z3D4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LYSMD3Q7Z3D4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.4■■□□□ 1.66
LYSMD3Q7Z3D4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LYSMD3Q7Z3D4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.4■■□□□ 1.66
LYSMD3Q7Z3D4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
LYSMD3Q7Z3D4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LYSMD3Q7Z3D4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
LYSMD3Q7Z3D4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
LYSMD3Q7Z3D4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.39■■□□□ 1.66
LYSMD3Q7Z3D4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
LYSMD3Q7Z3D4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LYSMD3Q7Z3D4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LYSMD3Q7Z3D4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
LYSMD3Q7Z3D4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LYSMD3Q7Z3D4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LYSMD3Q7Z3D4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
LYSMD3Q7Z3D4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LYSMD3Q7Z3D4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.37■■□□□ 1.65
LYSMD3Q7Z3D4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.37■■□□□ 1.65
LYSMD3Q7Z3D4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LYSMD3Q7Z3D4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LYSMD3Q7Z3D4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LYSMD3Q7Z3D4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.35■■□□□ 1.65
LYSMD3Q7Z3D4 AC142086.6-201ENST00000621154 1765 ntBASIC25.35■■□□□ 1.65
LYSMD3Q7Z3D4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.34■■□□□ 1.65
LYSMD3Q7Z3D4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
LYSMD3Q7Z3D4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LYSMD3Q7Z3D4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LYSMD3Q7Z3D4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.34■■□□□ 1.65
LYSMD3Q7Z3D4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LYSMD3Q7Z3D4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms