Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL54Q6P161 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL54Q6P161 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL54Q6P161 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL54Q6P161 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL54Q6P161 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL54Q6P161 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MRPL54Q6P161 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
MRPL54Q6P161 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MRPL54Q6P161 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL54Q6P161 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL54Q6P161 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL54Q6P161 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL54Q6P161 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL54Q6P161 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPL54Q6P161 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL54Q6P161 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL54Q6P161 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL54Q6P161 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL54Q6P161 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL54Q6P161 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL54Q6P161 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL54Q6P161 AC093323.1-202ENST00000635031 2045 ntBASIC19.06■□□□□ 0.64
MRPL54Q6P161 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
MRPL54Q6P161 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL54Q6P161 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPL54Q6P161 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL54Q6P161 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL54Q6P161 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.05■□□□□ 0.64
MRPL54Q6P161 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL54Q6P161 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL54Q6P161 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRPL54Q6P161 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL54Q6P161 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL54Q6P161 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL54Q6P161 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL54Q6P161 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL54Q6P161 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPL54Q6P161 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL54Q6P161 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL54Q6P161 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL54Q6P161 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL54Q6P161 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL54Q6P161 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL54Q6P161 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
MRPL54Q6P161 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MRPL54Q6P161 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MRPL54Q6P161 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPL54Q6P161 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPL54Q6P161 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPL54Q6P161 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
MRPL54Q6P161 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19■□□□□ 0.63
MRPL54Q6P161 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MRPL54Q6P161 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL54Q6P161 AC010864.1-201ENST00000609407 1511 ntBASIC19■□□□□ 0.63
MRPL54Q6P161 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL54Q6P161 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.99■□□□□ 0.63
MRPL54Q6P161 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MRPL54Q6P161 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL54Q6P161 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPL54Q6P161 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPL54Q6P161 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.98■□□□□ 0.63
MRPL54Q6P161 AC145676.1-201ENST00000514988 2004 ntBASIC18.98■□□□□ 0.63
MRPL54Q6P161 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPL54Q6P161 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.98■□□□□ 0.63
MRPL54Q6P161 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MRPL54Q6P161 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MRPL54Q6P161 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MRPL54Q6P161 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPL54Q6P161 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.96■□□□□ 0.63
MRPL54Q6P161 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPL54Q6P161 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.96■□□□□ 0.63
MRPL54Q6P161 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.96■□□□□ 0.63
MRPL54Q6P161 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPL54Q6P161 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MRPL54Q6P161 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.95■□□□□ 0.62
MRPL54Q6P161 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPL54Q6P161 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
MRPL54Q6P161 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MRPL54Q6P161 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.93■□□□□ 0.62
MRPL54Q6P161 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MRPL54Q6P161 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL54Q6P161 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
MRPL54Q6P161 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL54Q6P161 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.93■□□□□ 0.62
MRPL54Q6P161 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL54Q6P161 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MRPL54Q6P161 AP004833.2-201ENST00000532228 1454 ntBASIC18.92■□□□□ 0.62
MRPL54Q6P161 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
MRPL54Q6P161 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL54Q6P161 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL54Q6P161 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL54Q6P161 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL54Q6P161 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms