Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDNFP39905 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GDNFP39905 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.95■■□□□ 1.1
GDNFP39905 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.94■■□□□ 1.1
GDNFP39905 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDNFP39905 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDNFP39905 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDNFP39905 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDNFP39905 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GDNFP39905 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GDNFP39905 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.92■■□□□ 1.1
GDNFP39905 SUZ12P1-203ENST00000578195 985 ntBASIC21.92■■□□□ 1.1
GDNFP39905 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDNFP39905 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDNFP39905 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.91■■□□□ 1.1
GDNFP39905 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GDNFP39905 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDNFP39905 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDNFP39905 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDNFP39905 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GDNFP39905 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GDNFP39905 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GDNFP39905 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.88■■□□□ 1.09
GDNFP39905 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
GDNFP39905 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.88■■□□□ 1.09
GDNFP39905 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDNFP39905 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.88■■□□□ 1.09
GDNFP39905 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDNFP39905 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDNFP39905 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDNFP39905 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.87■■□□□ 1.09
GDNFP39905 AP004833.2-201ENST00000532228 1454 ntBASIC21.87■■□□□ 1.09
GDNFP39905 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.87■■□□□ 1.09
GDNFP39905 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDNFP39905 AC091060.1-201ENST00000623524 1766 ntBASIC21.87■■□□□ 1.09
GDNFP39905 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDNFP39905 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GDNFP39905 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.86■■□□□ 1.09
GDNFP39905 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GDNFP39905 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GDNFP39905 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GDNFP39905 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GDNFP39905 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GDNFP39905 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
GDNFP39905 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GDNFP39905 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
GDNFP39905 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDNFP39905 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
GDNFP39905 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
GDNFP39905 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.83■■□□□ 1.09
GDNFP39905 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GDNFP39905 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDNFP39905 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GDNFP39905 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.82■■□□□ 1.08
GDNFP39905 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDNFP39905 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDNFP39905 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDNFP39905 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
GDNFP39905 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.81■■□□□ 1.08
GDNFP39905 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GDNFP39905 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
GDNFP39905 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDNFP39905 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDNFP39905 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDNFP39905 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDNFP39905 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
GDNFP39905 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.79■■□□□ 1.08
GDNFP39905 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
GDNFP39905 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
GDNFP39905 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.79■■□□□ 1.08
GDNFP39905 AC020928.2-201ENST00000588717 2197 ntBASIC21.78■■□□□ 1.08
GDNFP39905 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDNFP39905 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.78■■□□□ 1.08
GDNFP39905 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDNFP39905 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
GDNFP39905 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
GDNFP39905 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
GDNFP39905 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GDNFP39905 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GDNFP39905 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GDNFP39905 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GDNFP39905 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GDNFP39905 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.76■■□□□ 1.07
GDNFP39905 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
GDNFP39905 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
GDNFP39905 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDNFP39905 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
GDNFP39905 MIR762-201ENST00000390236 83 ntBASIC21.75■■□□□ 1.07
GDNFP39905 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDNFP39905 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.75■■□□□ 1.07
GDNFP39905 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
GDNFP39905 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDNFP39905 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDNFP39905 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.74■■□□□ 1.07
GDNFP39905 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDNFP39905 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDNFP39905 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDNFP39905 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDNFP39905 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDNFP39905 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms