Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
GKN3PP0CG01 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
GKN3PP0CG01 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
GKN3PP0CG01 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GKN3PP0CG01 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
GKN3PP0CG01 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
GKN3PP0CG01 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GKN3PP0CG01 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.33■■□□□ 1.33
GKN3PP0CG01 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
GKN3PP0CG01 AP002414.2-202ENST00000590929 1450 ntBASIC23.32■■□□□ 1.32
GKN3PP0CG01 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.32■■□□□ 1.32
GKN3PP0CG01 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
GKN3PP0CG01 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.32■■□□□ 1.32
GKN3PP0CG01 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GKN3PP0CG01 LINC01003-201ENST00000564834 1764 ntBASIC23.32■■□□□ 1.32
GKN3PP0CG01 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
GKN3PP0CG01 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.32■■□□□ 1.32
GKN3PP0CG01 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
GKN3PP0CG01 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
GKN3PP0CG01 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
GKN3PP0CG01 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
GKN3PP0CG01 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.3■■□□□ 1.32
GKN3PP0CG01 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GKN3PP0CG01 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GKN3PP0CG01 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GKN3PP0CG01 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.3■■□□□ 1.32
GKN3PP0CG01 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GKN3PP0CG01 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GKN3PP0CG01 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GKN3PP0CG01 RPS2P35-201ENST00000443417 897 ntBASIC23.29■■□□□ 1.32
GKN3PP0CG01 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GKN3PP0CG01 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
GKN3PP0CG01 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
GKN3PP0CG01 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
GKN3PP0CG01 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
GKN3PP0CG01 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
GKN3PP0CG01 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
GKN3PP0CG01 AL121749.1-202ENST00000609313 2153 ntBASIC23.27■■□□□ 1.32
GKN3PP0CG01 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.26■■□□□ 1.31
GKN3PP0CG01 AC021231.2-201ENST00000594613 730 ntBASIC23.26■■□□□ 1.31
GKN3PP0CG01 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
GKN3PP0CG01 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
GKN3PP0CG01 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
GKN3PP0CG01 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.25■■□□□ 1.31
GKN3PP0CG01 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
GKN3PP0CG01 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
GKN3PP0CG01 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GKN3PP0CG01 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GKN3PP0CG01 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.24■■□□□ 1.31
GKN3PP0CG01 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.24■■□□□ 1.31
GKN3PP0CG01 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GKN3PP0CG01 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
GKN3PP0CG01 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
GKN3PP0CG01 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GKN3PP0CG01 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
GKN3PP0CG01 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.22■■□□□ 1.31
GKN3PP0CG01 DUX4L29-201ENST00000425409 679 ntBASIC23.22■■□□□ 1.31
GKN3PP0CG01 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
GKN3PP0CG01 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GKN3PP0CG01 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GKN3PP0CG01 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.21■■□□□ 1.31
GKN3PP0CG01 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GKN3PP0CG01 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GKN3PP0CG01 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.21■■□□□ 1.31
GKN3PP0CG01 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
GKN3PP0CG01 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GKN3PP0CG01 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
GKN3PP0CG01 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
GKN3PP0CG01 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.2■■□□□ 1.3
GKN3PP0CG01 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
GKN3PP0CG01 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
GKN3PP0CG01 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.19■■□□□ 1.3
GKN3PP0CG01 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GKN3PP0CG01 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GKN3PP0CG01 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
GKN3PP0CG01 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
GKN3PP0CG01 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
GKN3PP0CG01 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.18■■□□□ 1.3
GKN3PP0CG01 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.18■■□□□ 1.3
GKN3PP0CG01 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GKN3PP0CG01 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GKN3PP0CG01 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GKN3PP0CG01 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
GKN3PP0CG01 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GKN3PP0CG01 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GKN3PP0CG01 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GKN3PP0CG01 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
GKN3PP0CG01 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GKN3PP0CG01 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
GKN3PP0CG01 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GKN3PP0CG01 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
GKN3PP0CG01 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.15■■□□□ 1.3
GKN3PP0CG01 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GKN3PP0CG01 AC018358.1-201ENST00000631079 1402 ntBASIC23.15■■□□□ 1.3
GKN3PP0CG01 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.14■■□□□ 1.3
GKN3PP0CG01 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
GKN3PP0CG01 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GKN3PP0CG01 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GKN3PP0CG01 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.14■■□□□ 1.29
GKN3PP0CG01 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms