Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-AP01891 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-AP01891 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.27■■□□□ 1
HLA-AP01891 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-AP01891 AC091060.1-201ENST00000623524 1766 ntBASIC21.27■■□□□ 1
HLA-AP01891 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
HLA-AP01891 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-AP01891 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-AP01891 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
HLA-AP01891 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HLA-AP01891 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.25■□□□□ 0.99
HLA-AP01891 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-AP01891 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-AP01891 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
HLA-AP01891 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-AP01891 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-AP01891 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-AP01891 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HLA-AP01891 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
HLA-AP01891 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
HLA-AP01891 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HLA-AP01891 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-AP01891 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-AP01891 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-AP01891 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-AP01891 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HLA-AP01891 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HLA-AP01891 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLA-AP01891 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-AP01891 AC020928.2-201ENST00000588717 2197 ntBASIC21.21■□□□□ 0.99
HLA-AP01891 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-AP01891 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLA-AP01891 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-AP01891 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HLA-AP01891 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-AP01891 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-AP01891 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HLA-AP01891 RARRES2P7-201ENST00000567349 469 ntBASIC21.18■□□□□ 0.98
HLA-AP01891 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-AP01891 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HLA-AP01891 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-AP01891 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-AP01891 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-AP01891 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-AP01891 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-AP01891 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-AP01891 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-AP01891 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-AP01891 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.16■□□□□ 0.98
HLA-AP01891 AC145676.1-201ENST00000514988 2004 ntBASIC21.15■□□□□ 0.98
HLA-AP01891 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-AP01891 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-AP01891 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.14■□□□□ 0.98
HLA-AP01891 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-AP01891 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-AP01891 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HLA-AP01891 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-AP01891 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-AP01891 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-AP01891 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-AP01891 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-AP01891 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-AP01891 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HLA-AP01891 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-AP01891 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HLA-AP01891 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-AP01891 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-AP01891 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-AP01891 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-AP01891 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.11■□□□□ 0.97
HLA-AP01891 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HLA-AP01891 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.11■□□□□ 0.97
HLA-AP01891 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-AP01891 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-AP01891 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-AP01891 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-AP01891 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-AP01891 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-AP01891 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HLA-AP01891 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-AP01891 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-AP01891 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-AP01891 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-AP01891 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HLA-AP01891 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HLA-AP01891 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms