Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHD2O14647 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHD2O14647 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHD2O14647 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC36.4■■■■□ 3.42
CHD2O14647 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHD2O14647 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHD2O14647 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC36.38■■■■□ 3.41
CHD2O14647 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC36.38■■■■□ 3.41
CHD2O14647 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
CHD2O14647 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
CHD2O14647 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CHD2O14647 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC36.36■■■■□ 3.41
CHD2O14647 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
CHD2O14647 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC36.36■■■■□ 3.41
CHD2O14647 AL451085.2-201ENST00000605085 799 ntBASIC36.36■■■■□ 3.41
CHD2O14647 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
CHD2O14647 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC36.35■■■■□ 3.41
CHD2O14647 ECEL1P2-201ENST00000461596 1295 ntBASIC36.35■■■■□ 3.41
CHD2O14647 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC36.35■■■■□ 3.41
CHD2O14647 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CHD2O14647 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC36.34■■■■□ 3.41
CHD2O14647 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CHD2O14647 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC36.34■■■■□ 3.41
CHD2O14647 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC36.32■■■■□ 3.41
CHD2O14647 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CHD2O14647 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
CHD2O14647 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
CHD2O14647 MED25-210ENST00000612854 801 ntTSL 5 BASIC36.31■■■■□ 3.4
CHD2O14647 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
CHD2O14647 MED25-214ENST00000622402 642 ntTSL 5 BASIC36.31■■■■□ 3.4
CHD2O14647 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
CHD2O14647 HES4-204ENST00000484667 667 ntTSL 3 BASIC36.3■■■■□ 3.4
CHD2O14647 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC36.3■■■■□ 3.4
CHD2O14647 AC129492.7-201ENST00000622992 756 ntBASIC36.29■■■■□ 3.4
CHD2O14647 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC36.29■■■■□ 3.4
CHD2O14647 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
CHD2O14647 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CHD2O14647 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
CHD2O14647 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
CHD2O14647 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
CHD2O14647 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC36.25■■■■□ 3.39
CHD2O14647 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC36.24■■■■□ 3.39
CHD2O14647 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC36.23■■■■□ 3.39
CHD2O14647 AL035685.1-201ENST00000636663 812 ntBASIC36.23■■■■□ 3.39
CHD2O14647 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
CHD2O14647 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
CHD2O14647 AL592293.1-201ENST00000502889 1188 ntBASIC36.22■■■■□ 3.39
CHD2O14647 TRIR-205ENST00000592273 783 ntTSL 3 BASIC36.22■■■■□ 3.39
CHD2O14647 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
CHD2O14647 AC007029.1-201ENST00000604183 313 ntBASIC36.21■■■■□ 3.39
CHD2O14647 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC36.21■■■■□ 3.39
CHD2O14647 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
CHD2O14647 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
CHD2O14647 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC36.19■■■■□ 3.38
CHD2O14647 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC36.19■■■■□ 3.38
CHD2O14647 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
CHD2O14647 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC36.18■■■■□ 3.38
CHD2O14647 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
CHD2O14647 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC36.17■■■■□ 3.38
CHD2O14647 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
CHD2O14647 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC36.17■■■■□ 3.38
CHD2O14647 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC36.16■■■■□ 3.38
CHD2O14647 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
CHD2O14647 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
CHD2O14647 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
CHD2O14647 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHD2O14647 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC36.14■■■■□ 3.38
CHD2O14647 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHD2O14647 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
CHD2O14647 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC36.13■■■■□ 3.37
CHD2O14647 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
CHD2O14647 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC36.13■■■■□ 3.37
CHD2O14647 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC36.13■■■■□ 3.37
CHD2O14647 AC009831.1-201ENST00000580420 1582 ntBASIC36.12■■■■□ 3.37
CHD2O14647 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC36.12■■■■□ 3.37
CHD2O14647 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC36.12■■■■□ 3.37
CHD2O14647 AC019069.1-201ENST00000610008 1333 ntBASIC36.11■■■■□ 3.37
CHD2O14647 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC36.1■■■■□ 3.37
CHD2O14647 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC36.09■■■■□ 3.37
CHD2O14647 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
CHD2O14647 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC36.09■■■■□ 3.37
CHD2O14647 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC36.09■■■■□ 3.37
CHD2O14647 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
CHD2O14647 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CHD2O14647 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CHD2O14647 AL592295.1-201ENST00000400984 884 ntBASIC36.08■■■■□ 3.37
CHD2O14647 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC36.08■■■■□ 3.37
CHD2O14647 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC36.07■■■■□ 3.36
CHD2O14647 AC126177.7-201ENST00000547904 679 ntBASIC36.07■■■■□ 3.36
CHD2O14647 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.36
CHD2O14647 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC36.07■■■■□ 3.36
CHD2O14647 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
CHD2O14647 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC36.06■■■■□ 3.36
CHD2O14647 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
CHD2O14647 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC36.06■■■■□ 3.36
CHD2O14647 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC36.06■■■■□ 3.36
CHD2O14647 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
CHD2O14647 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CHD2O14647 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CHD2O14647 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC36.05■■■■□ 3.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms