Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
AP4M1O00189 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
AP4M1O00189 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
AP4M1O00189 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP4M1O00189 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.62■□□□□ 0.89
AP4M1O00189 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP4M1O00189 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP4M1O00189 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
AP4M1O00189 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.61■□□□□ 0.89
AP4M1O00189 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
AP4M1O00189 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4M1O00189 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP4M1O00189 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.59■□□□□ 0.89
AP4M1O00189 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.59■□□□□ 0.89
AP4M1O00189 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.59■□□□□ 0.89
AP4M1O00189 ABHD17AP4-201ENST00000411545 909 ntBASIC20.59■□□□□ 0.89
AP4M1O00189 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP4M1O00189 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.59■□□□□ 0.89
AP4M1O00189 AC021231.2-201ENST00000594613 730 ntBASIC20.59■□□□□ 0.89
AP4M1O00189 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
AP4M1O00189 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
AP4M1O00189 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP4M1O00189 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP4M1O00189 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.58■□□□□ 0.89
AP4M1O00189 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP4M1O00189 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP4M1O00189 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4M1O00189 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.57■□□□□ 0.88
AP4M1O00189 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4M1O00189 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4M1O00189 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4M1O00189 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.57■□□□□ 0.88
AP4M1O00189 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4M1O00189 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4M1O00189 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4M1O00189 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4M1O00189 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP4M1O00189 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4M1O00189 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
AP4M1O00189 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
AP4M1O00189 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4M1O00189 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP4M1O00189 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
AP4M1O00189 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
AP4M1O00189 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4M1O00189 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4M1O00189 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP4M1O00189 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP4M1O00189 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4M1O00189 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4M1O00189 ST7-AS1-201ENST00000456775 1889 ntBASIC20.53■□□□□ 0.88
AP4M1O00189 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4M1O00189 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
AP4M1O00189 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4M1O00189 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4M1O00189 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4M1O00189 ZNRF2P2-203ENST00000454624 420 ntBASIC20.52■□□□□ 0.88
AP4M1O00189 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4M1O00189 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP4M1O00189 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.51■□□□□ 0.87
AP4M1O00189 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4M1O00189 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.51■□□□□ 0.87
AP4M1O00189 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
AP4M1O00189 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.5■□□□□ 0.87
AP4M1O00189 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4M1O00189 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
AP4M1O00189 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.5■□□□□ 0.87
AP4M1O00189 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP4M1O00189 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4M1O00189 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.48■□□□□ 0.87
AP4M1O00189 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.48■□□□□ 0.87
AP4M1O00189 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4M1O00189 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.47■□□□□ 0.87
AP4M1O00189 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
AP4M1O00189 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
AP4M1O00189 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 MIR7108-201ENST00000614319 87 ntBASIC20.47■□□□□ 0.87
AP4M1O00189 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 AC127502.1-201ENST00000399971 1502 ntBASIC20.47■□□□□ 0.87
AP4M1O00189 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4M1O00189 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
AP4M1O00189 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
AP4M1O00189 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4M1O00189 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.46■□□□□ 0.87
AP4M1O00189 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP4M1O00189 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4M1O00189 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4M1O00189 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
AP4M1O00189 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4M1O00189 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4M1O00189 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms