Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV13-2A0A0B4J235 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV13-2A0A0B4J235 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV13-2A0A0B4J235 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV13-2A0A0B4J235 AC091060.1-201ENST00000623524 1766 ntBASIC16.72■□□□□ 0.27
TRAV13-2A0A0B4J235 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV13-2A0A0B4J235 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-2A0A0B4J235 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TRAV13-2A0A0B4J235 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRAV13-2A0A0B4J235 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-2A0A0B4J235 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-2A0A0B4J235 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV13-2A0A0B4J235 AP004833.2-201ENST00000532228 1454 ntBASIC16.7■□□□□ 0.26
TRAV13-2A0A0B4J235 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV13-2A0A0B4J235 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV13-2A0A0B4J235 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV13-2A0A0B4J235 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-2A0A0B4J235 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-2A0A0B4J235 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-2A0A0B4J235 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-2A0A0B4J235 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-2A0A0B4J235 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV13-2A0A0B4J235 AC145676.1-201ENST00000514988 2004 ntBASIC16.67■□□□□ 0.26
TRAV13-2A0A0B4J235 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-2A0A0B4J235 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV13-2A0A0B4J235 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV13-2A0A0B4J235 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-2A0A0B4J235 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 AC020928.2-201ENST00000588717 2197 ntBASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAV13-2A0A0B4J235 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-2A0A0B4J235 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV13-2A0A0B4J235 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV13-2A0A0B4J235 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-2A0A0B4J235 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-2A0A0B4J235 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-2A0A0B4J235 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-2A0A0B4J235 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV13-2A0A0B4J235 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV13-2A0A0B4J235 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-2A0A0B4J235 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 AC010864.1-201ENST00000609407 1511 ntBASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-2A0A0B4J235 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV13-2A0A0B4J235 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-2A0A0B4J235 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-2A0A0B4J235 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-2A0A0B4J235 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-2A0A0B4J235 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV13-2A0A0B4J235 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV13-2A0A0B4J235 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV13-2A0A0B4J235 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV13-2A0A0B4J235 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV13-2A0A0B4J235 AC093323.1-202ENST00000635031 2045 ntBASIC16.6■□□□□ 0.25
TRAV13-2A0A0B4J235 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRAV13-2A0A0B4J235 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 EBPL-203ENST00000378270 579 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-2A0A0B4J235 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms