Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV9A0A0B4J1U6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TRBV9A0A0B4J1U6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV9A0A0B4J1U6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV9A0A0B4J1U6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV9A0A0B4J1U6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV9A0A0B4J1U6 DUX4L29-201ENST00000425409 679 ntBASIC20.05■□□□□ 0.8
TRBV9A0A0B4J1U6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV9A0A0B4J1U6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRBV9A0A0B4J1U6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 AC021231.2-201ENST00000594613 730 ntBASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.04■□□□□ 0.8
TRBV9A0A0B4J1U6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV9A0A0B4J1U6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 WHAMMP2-203ENST00000563942 1603 ntBASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV9A0A0B4J1U6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TRBV9A0A0B4J1U6 DRD5P2-201ENST00000421395 2012 ntBASIC20.02■□□□□ 0.79
TRBV9A0A0B4J1U6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV9A0A0B4J1U6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV9A0A0B4J1U6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20■□□□□ 0.79
TRBV9A0A0B4J1U6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV9A0A0B4J1U6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV9A0A0B4J1U6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV9A0A0B4J1U6 AC100797.4-201ENST00000631653 1827 ntBASIC19.99■□□□□ 0.79
TRBV9A0A0B4J1U6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV9A0A0B4J1U6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV9A0A0B4J1U6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV9A0A0B4J1U6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV9A0A0B4J1U6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV9A0A0B4J1U6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV9A0A0B4J1U6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV9A0A0B4J1U6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV9A0A0B4J1U6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV9A0A0B4J1U6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV9A0A0B4J1U6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV9A0A0B4J1U6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.97■□□□□ 0.79
TRBV9A0A0B4J1U6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV9A0A0B4J1U6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV9A0A0B4J1U6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV9A0A0B4J1U6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.96■□□□□ 0.79
TRBV9A0A0B4J1U6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV9A0A0B4J1U6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRBV9A0A0B4J1U6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.96■□□□□ 0.79
TRBV9A0A0B4J1U6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV9A0A0B4J1U6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
TRBV9A0A0B4J1U6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV9A0A0B4J1U6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV9A0A0B4J1U6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV9A0A0B4J1U6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TRBV9A0A0B4J1U6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRBV9A0A0B4J1U6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV9A0A0B4J1U6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV9A0A0B4J1U6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.94■□□□□ 0.78
TRBV9A0A0B4J1U6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV9A0A0B4J1U6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV9A0A0B4J1U6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.93■□□□□ 0.78
TRBV9A0A0B4J1U6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TRBV9A0A0B4J1U6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRBV9A0A0B4J1U6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV9A0A0B4J1U6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV9A0A0B4J1U6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV9A0A0B4J1U6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms