Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 AC044849.2-201ENST00000606596 710 ntBASIC17.74■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 AC108673.1-201ENST00000510422 1159 ntBASIC17.71■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 AC087741.3-201ENST00000624270 1347 ntBASIC17.71■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 AC010864.1-201ENST00000609407 1511 ntBASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 RPS2P35-201ENST00000443417 897 ntBASIC17.67■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 BX255925.1-201ENST00000566954 1854 ntBASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.64■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV8-3A0A0A6YYJ7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms