Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AP003097.1-201ENST00000530657 1135 ntBASIC20.03■□□□□ 0.8
RFX6Q8HWS3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.03■□□□□ 0.8
RFX6Q8HWS3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 AL020996.1-203ENST00000536896 2307 ntBASIC20.03■□□□□ 0.8
RFX6Q8HWS3 HCG11-201ENST00000411553 5696 ntBASIC20.03■□□□□ 0.8
RFX6Q8HWS3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX6Q8HWS3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX6Q8HWS3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RFX6Q8HWS3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFX6Q8HWS3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX6Q8HWS3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX6Q8HWS3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX6Q8HWS3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20■□□□□ 0.79
RFX6Q8HWS3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 KRT17P3-201ENST00000420566 1262 ntBASIC20■□□□□ 0.79
RFX6Q8HWS3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20■□□□□ 0.79
RFX6Q8HWS3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20■□□□□ 0.79
RFX6Q8HWS3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 AC020763.4-201ENST00000623414 4170 ntBASIC20■□□□□ 0.79
RFX6Q8HWS3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RFX6Q8HWS3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX6Q8HWS3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX6Q8HWS3 AL049812.1-201ENST00000432563 2267 ntBASIC20■□□□□ 0.79
RFX6Q8HWS3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20■□□□□ 0.79
RFX6Q8HWS3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFX6Q8HWS3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX6Q8HWS3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RFX6Q8HWS3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms