RNA–Protein interactions for RNA: ENST00000262662.5

CDKN2C-201, Transcript of cyclin dependent kinase inhibitor 2C, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN2C, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2C-201ENST00000262662 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
CDKN2C-201ENST00000262662 SHROOM4Q9ULL8 1493 aa33.23■■■□□ 2.91
CDKN2C-201ENST00000262662 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
CDKN2C-201ENST00000262662 HRCP23327 699 aa32.23■■■□□ 2.75
CDKN2C-201ENST00000262662 MYO15BQ96JP2 1530 aa32.09■■■□□ 2.73
CDKN2C-201ENST00000262662 PCGF6Q9BYE7 350 aa32.09■■■□□ 2.73
CDKN2C-201ENST00000262662 PPARGC1BQ86YN6 1023 aaKnown RBP31.98■■■□□ 2.71
CDKN2C-201ENST00000262662 CHIC1Q5VXU3 224 aa31.96■■■□□ 2.71
CDKN2C-201ENST00000262662 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
CDKN2C-201ENST00000262662 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
CDKN2C-201ENST00000262662 LOC105371045A0A1W2PR82 267 aa31.45■■■□□ 2.62
CDKN2C-201ENST00000262662 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.54
CDKN2C-201ENST00000262662 TRIM26Q12899 539 aaPredicted RBP30.87■■■□□ 2.53
CDKN2C-201ENST00000262662 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
CDKN2C-201ENST00000262662 EHMT2Q96KQ7 1210 aa30.65■■■□□ 2.5
CDKN2C-201ENST00000262662 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
CDKN2C-201ENST00000262662 SCAF1Q9H7N4 1312 aaKnown RBP30.4■■■□□ 2.46
CDKN2C-201ENST00000262662 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
CDKN2C-201ENST00000262662 ZEB1P37275 1124 aaPredicted RBP30.29■■■□□ 2.44
CDKN2C-201ENST00000262662 PELP1Q8IZL8 1130 aaKnown RBP30.11■■■□□ 2.41
CDKN2C-201ENST00000262662 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
CDKN2C-201ENST00000262662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.92■■■□□ 2.38
CDKN2C-201ENST00000262662 ABCC9O60706 1549 aa29.87■■■□□ 2.37
CDKN2C-201ENST00000262662 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
CDKN2C-201ENST00000262662 TTBK1Q5TCY1 1321 aaPredicted RBP29.78■■■□□ 2.36
CDKN2C-201ENST00000262662 NEUROD1Q13562 356 aa29.76■■■□□ 2.35
CDKN2C-201ENST00000262662 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
CDKN2C-201ENST00000262662 CCER1Q8TC90 406 aaPredicted RBP29.75■■■□□ 2.35
CDKN2C-201ENST00000262662 ACIN1Q9UKV3 1341 aaKnown RBP29.67■■■□□ 2.34
CDKN2C-201ENST00000262662 GTF3C3Q9Y5Q9 886 aa29.56■■■□□ 2.32
CDKN2C-201ENST00000262662 DIEXFQ68CQ4 756 aaKnown RBP29.5■■■□□ 2.31
CDKN2C-201ENST00000262662 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
CDKN2C-201ENST00000262662 CENPBP07199 599 aaPredicted RBP29.3■■■□□ 2.28
CDKN2C-201ENST00000262662 YTHDC1Q96MU7 727 aaKnown RBP29.27■■■□□ 2.28
CDKN2C-201ENST00000262662 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
CDKN2C-201ENST00000262662 WIZO95785 1651 aa29.07■■■□□ 2.24
CDKN2C-201ENST00000262662 ZNF316A6NFI3 1004 aaPredicted RBP28.94■■■□□ 2.22
CDKN2C-201ENST00000262662 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
CDKN2C-201ENST00000262662 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
CDKN2C-201ENST00000262662 CEP162Q5TB80 1403 aa28.87■■■□□ 2.21
CDKN2C-201ENST00000262662 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
CDKN2C-201ENST00000262662 MIER1Q8N108 512 aa28.85■■■□□ 2.21
CDKN2C-201ENST00000262662 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
CDKN2C-201ENST00000262662 SOGA1O94964 1423 aa28.79■■■□□ 2.2
CDKN2C-201ENST00000262662 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
CDKN2C-201ENST00000262662 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
CDKN2C-201ENST00000262662 MYT1Q01538 1121 aa28.65■■■□□ 2.18
CDKN2C-201ENST00000262662 EIF4G1Q04637 1599 aaKnown RBP28.63■■■□□ 2.17
CDKN2C-201ENST00000262662 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
CDKN2C-201ENST00000262662 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
CDKN2C-201ENST00000262662 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
CDKN2C-201ENST00000262662 TNIKQ9UKE5 1360 aa28.58■■■□□ 2.17
CDKN2C-201ENST00000262662 NACADO15069 1562 aa28.5■■■□□ 2.15
CDKN2C-201ENST00000262662 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
CDKN2C-201ENST00000262662 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
CDKN2C-201ENST00000262662 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
CDKN2C-201ENST00000262662 APLP2Q06481 763 aa28.25■■■□□ 2.11
CDKN2C-201ENST00000262662 EEA1Q15075 1411 aa28.18■■■□□ 2.1
CDKN2C-201ENST00000262662 CLIP1P30622 1438 aa28.17■■■□□ 2.1
CDKN2C-201ENST00000262662 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
CDKN2C-201ENST00000262662 SUPT16HQ9Y5B9 1047 aaKnown RBP28.15■■■□□ 2.1
CDKN2C-201ENST00000262662 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
CDKN2C-201ENST00000262662 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
CDKN2C-201ENST00000262662 CEP164Q9UPV0 1460 aa28.01■■■□□ 2.07
CDKN2C-201ENST00000262662 RAPGEF2Q9Y4G8 1499 aa27.96■■■□□ 2.07
CDKN2C-201ENST00000262662 KCNH8Q96L42 1107 aa27.95■■■□□ 2.07
CDKN2C-201ENST00000262662 ITGAEP38570 1179 aa27.93■■■□□ 2.06
CDKN2C-201ENST00000262662 BCANQ96GW7 911 aa27.92■■■□□ 2.06
CDKN2C-201ENST00000262662 DHX57Q6P158 1386 aaKnown RBP27.91■■■□□ 2.06
CDKN2C-201ENST00000262662 SYNJ1O43426 1573 aa27.91■■■□□ 2.06
CDKN2C-201ENST00000262662 TSHZ2Q9NRE2 1034 aa27.91■■■□□ 2.06
CDKN2C-201ENST00000262662 KANK4Q5T7N3 995 aaPredicted RBP27.88■■■□□ 2.05
CDKN2C-201ENST00000262662 KIF21BO75037 1637 aa27.8■■■□□ 2.04
CDKN2C-201ENST00000262662 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
CDKN2C-201ENST00000262662 ANP32EQ9BTT0 268 aa27.66■■■□□ 2.02
CDKN2C-201ENST00000262662 CLSPNQ9HAW4 1339 aa27.65■■■□□ 2.02
CDKN2C-201ENST00000262662 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
CDKN2C-201ENST00000262662 FKBP8Q14318 412 aa27.62■■■□□ 2.01
CDKN2C-201ENST00000262662 DDX10Q13206 875 aaKnown RBP27.57■■■□□ 2
CDKN2C-201ENST00000262662 HIRIP3Q9BW71 556 aaPredicted RBP27.57■■■□□ 2
CDKN2C-201ENST00000262662 ARAP1Q96P48 1450 aa27.53■■■□□ 2
CDKN2C-201ENST00000262662 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
CDKN2C-201ENST00000262662 TRIM52Q96A61 297 aa27.46■■□□□ 1.99
CDKN2C-201ENST00000262662 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
CDKN2C-201ENST00000262662 RAB3GAP2Q9H2M9 1393 aa27.39■■□□□ 1.98
CDKN2C-201ENST00000262662 RRBP1Q9P2E9 1410 aaKnown RBP27.38■■□□□ 1.97
CDKN2C-201ENST00000262662 BCL11AQ9H165 835 aa27.37■■□□□ 1.97
CDKN2C-201ENST00000262662 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
CDKN2C-201ENST00000262662 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
CDKN2C-201ENST00000262662 PRXQ9BXM0 1461 aa27.31■■□□□ 1.96
CDKN2C-201ENST00000262662 RBM19Q9Y4C8 960 aaKnown RBP27.31■■□□□ 1.96
CDKN2C-201ENST00000262662 FAM50AQ14320 339 aaKnown RBP27.3■■□□□ 1.96
CDKN2C-201ENST00000262662 NEFLP07196 543 aa27.28■■□□□ 1.96
CDKN2C-201ENST00000262662 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
CDKN2C-201ENST00000262662 ATP1B4Q9UN42 357 aaPredicted RBP27.27■■□□□ 1.96
CDKN2C-201ENST00000262662 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
CDKN2C-201ENST00000262662 MAPKBP1O60336 1514 aa27.25■■□□□ 1.95
CDKN2C-201ENST00000262662 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
CDKN2C-201ENST00000262662 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
CDKN2C-201ENST00000262662 P3H3Q8IVL6 736 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms