RNA–Protein interactions for RNA: ENST00000614064.4

GTF2IRD2B-206, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-206ENST00000614064 NISCHQ9Y2I1 1504 aa48.38■■■■■ 5.34
GTF2IRD2B-206ENST00000614064 CCDC180Q9P1Z9 1646 aa43.18■■■■■ 4.5
GTF2IRD2B-206ENST00000614064 ABCC9O60706 1549 aa42.06■■■■■ 4.32
GTF2IRD2B-206ENST00000614064 RB1CC1Q8TDY2 1594 aa40.52■■■■■ 4.08
GTF2IRD2B-206ENST00000614064 NACADO15069 1562 aa40.49■■■■■ 4.07
GTF2IRD2B-206ENST00000614064 ZCCHC6Q5VYS8 1495 aaKnown RBP40.34■■■■■ 4.05
GTF2IRD2B-206ENST00000614064 MYO15BQ96JP2 1530 aa40.32■■■■■ 4.05
GTF2IRD2B-206ENST00000614064 DCAF8L2P0C7V8 631 aa40.3■■■■■ 4.04
GTF2IRD2B-206ENST00000614064 DCAF1Q9Y4B6 1507 aa40.13■■■■■ 4.01
GTF2IRD2B-206ENST00000614064 UNC13AQ9UPW8 1703 aa39.71■■■■□ 3.95
GTF2IRD2B-206ENST00000614064 PABPN1Q86U42 306 aaKnown RBP eCLIP39.31■■■■□ 3.88
GTF2IRD2B-206ENST00000614064 BICRAQ9NZM4 1560 aa39.29■■■■□ 3.88
GTF2IRD2B-206ENST00000614064 SCRIBQ14160 1630 aa39.22■■■■□ 3.87
GTF2IRD2B-206ENST00000614064 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
GTF2IRD2B-206ENST00000614064 DNAJC5BQ9UF47 199 aa38.82■■■■□ 3.8
GTF2IRD2B-206ENST00000614064 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
GTF2IRD2B-206ENST00000614064 CC2D2AQ9P2K1 1620 aa38.06■■■■□ 3.68
GTF2IRD2B-206ENST00000614064 CECR2Q9BXF3 1484 aa37.79■■■■□ 3.64
GTF2IRD2B-206ENST00000614064 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
GTF2IRD2B-206ENST00000614064 BAZ1AQ9NRL2 1556 aaPredicted RBP37.53■■■■□ 3.6
GTF2IRD2B-206ENST00000614064 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
GTF2IRD2B-206ENST00000614064 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
GTF2IRD2B-206ENST00000614064 ATAD2BQ9ULI0 1458 aa37.3■■■■□ 3.56
GTF2IRD2B-206ENST00000614064 PEG3Q9GZU2 1588 aa37.28■■■■□ 3.56
GTF2IRD2B-206ENST00000614064 MROH2BQ7Z745 1585 aa37.24■■■■□ 3.55
GTF2IRD2B-206ENST00000614064 HMGXB3Q12766 1538 aa37.2■■■■□ 3.55
GTF2IRD2B-206ENST00000614064 BAZ1BQ9UIG0 1483 aaKnown RBP37■■■■□ 3.51
GTF2IRD2B-206ENST00000614064 WIZO95785 1651 aa36.88■■■■□ 3.49
GTF2IRD2B-206ENST00000614064 RSF1Q96T23 1441 aaPredicted RBP36.8■■■■□ 3.48
GTF2IRD2B-206ENST00000614064 TOP2AP11388 1531 aaKnown RBP36.53■■■■□ 3.44
GTF2IRD2B-206ENST00000614064 LAMC3Q9Y6N6 1575 aa36.38■■■■□ 3.41
GTF2IRD2B-206ENST00000614064 NESP48681 1621 aa36.32■■■■□ 3.4
GTF2IRD2B-206ENST00000614064 ERCC6Q03468 1493 aa36.28■■■■□ 3.4
GTF2IRD2B-206ENST00000614064 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
GTF2IRD2B-206ENST00000614064 KIF21AQ7Z4S6 1674 aa36.05■■■■□ 3.36
GTF2IRD2B-206ENST00000614064 PDS5BQ9NTI5 1447 aa36.04■■■■□ 3.36
GTF2IRD2B-206ENST00000614064 CCDC88BA6NC98 1476 aa36■■■■□ 3.35
GTF2IRD2B-206ENST00000614064 CFTRP13569 1480 aa36■■■■□ 3.35
GTF2IRD2B-206ENST00000614064 PRDM2Q13029 1718 aa35.96■■■■□ 3.35
GTF2IRD2B-206ENST00000614064 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
GTF2IRD2B-206ENST00000614064 CUX2O14529 1486 aa35.9■■■■□ 3.34
GTF2IRD2B-206ENST00000614064 FANCD2Q9BXW9 1451 aa35.76■■■■□ 3.32
GTF2IRD2B-206ENST00000614064 CEP164Q9UPV0 1460 aa35.74■■■■□ 3.31
GTF2IRD2B-206ENST00000614064 SUPT5HO00267 1087 aaKnown RBP35.7■■■■□ 3.31
GTF2IRD2B-206ENST00000614064 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
GTF2IRD2B-206ENST00000614064 WDR62O43379 1518 aa35.63■■■■□ 3.29
GTF2IRD2B-206ENST00000614064 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
GTF2IRD2B-206ENST00000614064 ABCC8Q09428 1581 aa35.26■■■■□ 3.24
GTF2IRD2B-206ENST00000614064 DNMBPQ6XZF7 1577 aa35.24■■■■□ 3.23
GTF2IRD2B-206ENST00000614064 TOPBP1Q92547 1522 aa35.22■■■■□ 3.23
GTF2IRD2B-206ENST00000614064 DNAJC5Q9H3Z4 198 aa35.13■■■■□ 3.21
GTF2IRD2B-206ENST00000614064 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
GTF2IRD2B-206ENST00000614064 CUX1P39880 1505 aa34.96■■■■□ 3.19
GTF2IRD2B-206ENST00000614064 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
GTF2IRD2B-206ENST00000614064 TARBP1Q13395 1621 aaKnown RBP34.9■■■■□ 3.18
GTF2IRD2B-206ENST00000614064 FGD5Q6ZNL6 1462 aa34.83■■■■□ 3.17
GTF2IRD2B-206ENST00000614064 ZNF608Q9ULD9 1512 aaPredicted RBP34.78■■■■□ 3.16
GTF2IRD2B-206ENST00000614064 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
GTF2IRD2B-206ENST00000614064 EIF4G3O43432 1585 aaKnown RBP34.76■■■■□ 3.16
GTF2IRD2B-206ENST00000614064 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
GTF2IRD2B-206ENST00000614064 WDR97A6NE52 1622 aa34.72■■■■□ 3.15
GTF2IRD2B-206ENST00000614064 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
GTF2IRD2B-206ENST00000614064 SOGA1O94964 1423 aa34.71■■■■□ 3.15
GTF2IRD2B-206ENST00000614064 RAD54L2Q9Y4B4 1467 aa34.69■■■■□ 3.14
GTF2IRD2B-206ENST00000614064 SYNJ1O43426 1573 aa34.67■■■■□ 3.14
GTF2IRD2B-206ENST00000614064 AQRO60306 1485 aaKnown RBP eCLIP34.55■■■■□ 3.12
GTF2IRD2B-206ENST00000614064 ABCA10Q8WWZ4 1543 aa34.54■■■■□ 3.12
GTF2IRD2B-206ENST00000614064 TDRD9Q8NDG6 1382 aaKnown RBP34.46■■■■□ 3.11
GTF2IRD2B-206ENST00000614064 ABCA5Q8WWZ7 1642 aa34.45■■■■□ 3.11
GTF2IRD2B-206ENST00000614064 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
GTF2IRD2B-206ENST00000614064 PBRM1Q86U86 1689 aa34.42■■■■□ 3.1
GTF2IRD2B-206ENST00000614064 GRIN2BQ13224 1484 aa34.37■■■■□ 3.09
GTF2IRD2B-206ENST00000614064 CHD1O14646 1710 aa34.35■■■■□ 3.09
GTF2IRD2B-206ENST00000614064 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
GTF2IRD2B-206ENST00000614064 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
GTF2IRD2B-206ENST00000614064 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
GTF2IRD2B-206ENST00000614064 FBLN2P98095 1184 aa34.24■■■■□ 3.07
GTF2IRD2B-206ENST00000614064 SYNJ2O15056 1496 aa34.15■■■■□ 3.06
GTF2IRD2B-206ENST00000614064 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
GTF2IRD2B-206ENST00000614064 ADAMTS12P58397 1594 aa34.11■■■■□ 3.05
GTF2IRD2B-206ENST00000614064 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
GTF2IRD2B-206ENST00000614064 TRIM41Q8WV44 630 aa34■■■■□ 3.03
GTF2IRD2B-206ENST00000614064 KIF27Q86VH2 1401 aa33.99■■■■□ 3.03
GTF2IRD2B-206ENST00000614064 FHAD1B1AJZ9 1412 aa33.97■■■■□ 3.03
GTF2IRD2B-206ENST00000614064 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
GTF2IRD2B-206ENST00000614064 GRIN2AQ12879 1464 aa33.94■■■■□ 3.02
GTF2IRD2B-206ENST00000614064 RIMBP3CA6NJZ7 1639 aa33.9■■■■□ 3.02
GTF2IRD2B-206ENST00000614064 RIMBP3BA6NNM3 1639 aa33.9■■■■□ 3.02
GTF2IRD2B-206ENST00000614064 RIMBP3Q9UFD9 1639 aa33.9■■■■□ 3.02
GTF2IRD2B-206ENST00000614064 CUL7Q14999 1698 aa33.9■■■■□ 3.02
GTF2IRD2B-206ENST00000614064 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
GTF2IRD2B-206ENST00000614064 IGF1RP08069 1367 aa33.8■■■■□ 3
GTF2IRD2B-206ENST00000614064 NUP160Q12769 1436 aa33.79■■■■□ 3
GTF2IRD2B-206ENST00000614064 CEP170Q5SW79 1584 aa33.78■■■■□ 3
GTF2IRD2B-206ENST00000614064 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
GTF2IRD2B-206ENST00000614064 SHROOM2Q13796 1616 aa33.63■■■□□ 2.97
GTF2IRD2B-206ENST00000614064 RUSC2Q8N2Y8 1516 aa33.61■■■□□ 2.97
GTF2IRD2B-206ENST00000614064 CARMIL1Q5VZK9 1371 aa33.6■■■□□ 2.97
GTF2IRD2B-206ENST00000614064 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
GTF2IRD2B-206ENST00000614064 KIAA0586Q9BVV6 1533 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms