RNA–Protein interactions for RNA: ENST00000273590.3

TCTA-201, Transcript of T cell leukemia translocation altered, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCTA, Length 2,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTA-201ENST00000273590 NISCHQ9Y2I1 1504 aa41.56■■■■■ 4.24
TCTA-201ENST00000273590 CCDC180Q9P1Z9 1646 aa35.73■■■■□ 3.31
TCTA-201ENST00000273590 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
TCTA-201ENST00000273590 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
TCTA-201ENST00000273590 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
TCTA-201ENST00000273590 DCAF1Q9Y4B6 1507 aa34.19■■■■□ 3.06
TCTA-201ENST00000273590 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
TCTA-201ENST00000273590 ABCC9O60706 1549 aa33.52■■■□□ 2.96
TCTA-201ENST00000273590 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
TCTA-201ENST00000273590 SCRIBQ14160 1630 aa33.25■■■□□ 2.91
TCTA-201ENST00000273590 NACADO15069 1562 aa33.16■■■□□ 2.9
TCTA-201ENST00000273590 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
TCTA-201ENST00000273590 RSF1Q96T23 1441 aaPredicted RBP32.59■■■□□ 2.81
TCTA-201ENST00000273590 CHIC1Q5VXU3 224 aa32.55■■■□□ 2.8
TCTA-201ENST00000273590 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
TCTA-201ENST00000273590 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
TCTA-201ENST00000273590 UNC13AQ9UPW8 1703 aa32.22■■■□□ 2.75
TCTA-201ENST00000273590 WIZO95785 1651 aa32.02■■■□□ 2.72
TCTA-201ENST00000273590 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
TCTA-201ENST00000273590 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
TCTA-201ENST00000273590 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.69
TCTA-201ENST00000273590 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
TCTA-201ENST00000273590 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
TCTA-201ENST00000273590 TRIM41Q8WV44 630 aa31.51■■■□□ 2.63
TCTA-201ENST00000273590 LOC105371045A0A1W2PR82 267 aa31.49■■■□□ 2.63
TCTA-201ENST00000273590 CCDC88BA6NC98 1476 aa31.38■■■□□ 2.61
TCTA-201ENST00000273590 EIF4G1Q04637 1599 aaKnown RBP31.38■■■□□ 2.61
TCTA-201ENST00000273590 SMARCA2P51531 1590 aa31.36■■■□□ 2.61
TCTA-201ENST00000273590 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
TCTA-201ENST00000273590 FAM9AQ8IZU1 332 aaPredicted RBP31.15■■■□□ 2.58
TCTA-201ENST00000273590 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
TCTA-201ENST00000273590 ABCC8Q09428 1581 aa31.02■■■□□ 2.56
TCTA-201ENST00000273590 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
TCTA-201ENST00000273590 EHMT2Q96KQ7 1210 aa30.83■■■□□ 2.53
TCTA-201ENST00000273590 PCGF6Q9BYE7 350 aa30.72■■■□□ 2.51
TCTA-201ENST00000273590 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
TCTA-201ENST00000273590 HMGXB3Q12766 1538 aa30.64■■■□□ 2.49
TCTA-201ENST00000273590 WRNQ14191 1432 aaPredicted RBP eCLIP30.61■■■□□ 2.49
TCTA-201ENST00000273590 SOGA1O94964 1423 aa30.6■■■□□ 2.49
TCTA-201ENST00000273590 SYNJ1O43426 1573 aa30.51■■■□□ 2.48
TCTA-201ENST00000273590 RUSC2Q8N2Y8 1516 aa30.49■■■□□ 2.47
TCTA-201ENST00000273590 EEA1Q15075 1411 aa30.38■■■□□ 2.45
TCTA-201ENST00000273590 TRIM26Q12899 539 aaPredicted RBP30.37■■■□□ 2.45
TCTA-201ENST00000273590 CSRNP3Q8WYN3 585 aa30.35■■■□□ 2.45
TCTA-201ENST00000273590 HRCP23327 699 aa30.31■■■□□ 2.44
TCTA-201ENST00000273590 CC2D2AQ9P2K1 1620 aa30.24■■■□□ 2.43
TCTA-201ENST00000273590 CFTRP13569 1480 aa30.23■■■□□ 2.43
TCTA-201ENST00000273590 TOP2BQ02880 1626 aa30.22■■■□□ 2.43
TCTA-201ENST00000273590 TNIKQ9UKE5 1360 aa30.17■■■□□ 2.42
TCTA-201ENST00000273590 BIVM-ERCC5R4GMW8 1640 aa30.15■■■□□ 2.42
TCTA-201ENST00000273590 CEP162Q5TB80 1403 aa30.13■■■□□ 2.41
TCTA-201ENST00000273590 GOLGA3Q08378 1498 aa30.11■■■□□ 2.41
TCTA-201ENST00000273590 UBTFP17480 764 aaKnown RBP30.09■■■□□ 2.41
TCTA-201ENST00000273590 CUX1P39880 1505 aa30.08■■■□□ 2.41
TCTA-201ENST00000273590 PPARGC1BQ86YN6 1023 aaKnown RBP30.05■■■□□ 2.4
TCTA-201ENST00000273590 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
TCTA-201ENST00000273590 KIF21BO75037 1637 aa30.02■■■□□ 2.4
TCTA-201ENST00000273590 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
TCTA-201ENST00000273590 PRDM2Q13029 1718 aa29.97■■■□□ 2.39
TCTA-201ENST00000273590 RAPGEF2Q9Y4G8 1499 aa29.89■■■□□ 2.38
TCTA-201ENST00000273590 PRXQ9BXM0 1461 aa29.74■■■□□ 2.35
TCTA-201ENST00000273590 KIF27Q86VH2 1401 aa29.73■■■□□ 2.35
TCTA-201ENST00000273590 CLIP1P30622 1438 aa29.71■■■□□ 2.35
TCTA-201ENST00000273590 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.34
TCTA-201ENST00000273590 NESP48681 1621 aa29.68■■■□□ 2.34
TCTA-201ENST00000273590 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
TCTA-201ENST00000273590 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
TCTA-201ENST00000273590 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
TCTA-201ENST00000273590 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
TCTA-201ENST00000273590 RANGAP1P46060 587 aaPredicted RBP29.6■■■□□ 2.33
TCTA-201ENST00000273590 CUX2O14529 1486 aa29.58■■■□□ 2.33
TCTA-201ENST00000273590 VPS8Q8N3P4 1428 aa29.52■■■□□ 2.32
TCTA-201ENST00000273590 IGF1RP08069 1367 aa29.49■■■□□ 2.31
TCTA-201ENST00000273590 DNMBPQ6XZF7 1577 aa29.48■■■□□ 2.31
TCTA-201ENST00000273590 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
TCTA-201ENST00000273590 TOPBP1Q92547 1522 aa29.45■■■□□ 2.31
TCTA-201ENST00000273590 RAD54L2Q9Y4B4 1467 aa29.4■■■□□ 2.3
TCTA-201ENST00000273590 ZEB1P37275 1124 aaPredicted RBP29.38■■■□□ 2.29
TCTA-201ENST00000273590 POLA1P09884 1462 aaPredicted RBP29.38■■■□□ 2.29
TCTA-201ENST00000273590 ARAP1Q96P48 1450 aa29.38■■■□□ 2.29
TCTA-201ENST00000273590 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
TCTA-201ENST00000273590 CARMIL1Q5VZK9 1371 aa29.33■■■□□ 2.29
TCTA-201ENST00000273590 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
TCTA-201ENST00000273590 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
TCTA-201ENST00000273590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.26■■■□□ 2.27
TCTA-201ENST00000273590 APLP2Q06481 763 aa29.24■■■□□ 2.27
TCTA-201ENST00000273590 ARHGAP35Q9NRY4 1499 aa29.23■■■□□ 2.27
TCTA-201ENST00000273590 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
TCTA-201ENST00000273590 CCER1Q8TC90 406 aaPredicted RBP29.12■■■□□ 2.25
TCTA-201ENST00000273590 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
TCTA-201ENST00000273590 TDRD9Q8NDG6 1382 aaKnown RBP29.05■■■□□ 2.24
TCTA-201ENST00000273590 KANK4Q5T7N3 995 aaPredicted RBP29.05■■■□□ 2.24
TCTA-201ENST00000273590 CUL7Q14999 1698 aa29.02■■■□□ 2.24
TCTA-201ENST00000273590 ABCA5Q8WWZ7 1642 aa29.01■■■□□ 2.23
TCTA-201ENST00000273590 HNRNPUL2Q1KMD3 747 aaKnown RBP28.99■■■□□ 2.23
TCTA-201ENST00000273590 GAPVD1Q14C86 1478 aa28.96■■■□□ 2.23
TCTA-201ENST00000273590 TARBP1Q13395 1621 aaKnown RBP28.93■■■□□ 2.22
TCTA-201ENST00000273590 P3H3Q8IVL6 736 aa28.89■■■□□ 2.22
TCTA-201ENST00000273590 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
TCTA-201ENST00000273590 CTTNBP2Q8WZ74 1663 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms