RNA–Protein interactions for RNA: ENST00000390655.10

CD8B-203, Transcript of CD8b molecule, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CD8B, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD8B-203ENST00000390655 NISCHQ9Y2I1 1504 aa47.18■■■■■ 5.14
CD8B-203ENST00000390655 CCDC180Q9P1Z9 1646 aa41.85■■■■■ 4.29
CD8B-203ENST00000390655 ABCC9O60706 1549 aa40.78■■■■■ 4.12
CD8B-203ENST00000390655 DCAF8L2P0C7V8 631 aa39.47■■■■□ 3.91
CD8B-203ENST00000390655 ZCCHC6Q5VYS8 1495 aaKnown RBP39.34■■■■□ 3.89
CD8B-203ENST00000390655 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
CD8B-203ENST00000390655 NACADO15069 1562 aa39.28■■■■□ 3.88
CD8B-203ENST00000390655 MYO15BQ96JP2 1530 aa39.06■■■■□ 3.84
CD8B-203ENST00000390655 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
CD8B-203ENST00000390655 UNC13AQ9UPW8 1703 aa38.46■■■■□ 3.75
CD8B-203ENST00000390655 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
CD8B-203ENST00000390655 PABPN1Q86U42 306 aaKnown RBP eCLIP38.17■■■■□ 3.7
CD8B-203ENST00000390655 BICRAQ9NZM4 1560 aa38.08■■■■□ 3.69
CD8B-203ENST00000390655 SHROOM4Q9ULL8 1493 aa37.63■■■■□ 3.62
CD8B-203ENST00000390655 DNAJC5BQ9UF47 199 aa37.19■■■■□ 3.54
CD8B-203ENST00000390655 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
CD8B-203ENST00000390655 CC2D2AQ9P2K1 1620 aa36.88■■■■□ 3.5
CD8B-203ENST00000390655 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
CD8B-203ENST00000390655 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
CD8B-203ENST00000390655 BAZ1AQ9NRL2 1556 aaPredicted RBP36.56■■■■□ 3.44
CD8B-203ENST00000390655 MROH2BQ7Z745 1585 aa36.39■■■■□ 3.42
CD8B-203ENST00000390655 ATAD2BQ9ULI0 1458 aa36.3■■■■□ 3.4
CD8B-203ENST00000390655 SMARCA2P51531 1590 aa36.28■■■■□ 3.4
CD8B-203ENST00000390655 NCAPD3P42695 1498 aa36.21■■■■□ 3.39
CD8B-203ENST00000390655 PEG3Q9GZU2 1588 aa36.16■■■■□ 3.38
CD8B-203ENST00000390655 HMGXB3Q12766 1538 aa36.08■■■■□ 3.37
CD8B-203ENST00000390655 WIZO95785 1651 aa36.06■■■■□ 3.36
CD8B-203ENST00000390655 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
CD8B-203ENST00000390655 RSF1Q96T23 1441 aaPredicted RBP36.04■■■■□ 3.36
CD8B-203ENST00000390655 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
CD8B-203ENST00000390655 SUPT5HO00267 1087 aaKnown RBP35.42■■■■□ 3.26
CD8B-203ENST00000390655 NESP48681 1621 aa35.35■■■■□ 3.25
CD8B-203ENST00000390655 LAMC3Q9Y6N6 1575 aa35.27■■■■□ 3.24
CD8B-203ENST00000390655 CCDC88BA6NC98 1476 aa35.23■■■■□ 3.23
CD8B-203ENST00000390655 CADPSQ9ULU8 1353 aa35.2■■■■□ 3.23
CD8B-203ENST00000390655 ERCC6Q03468 1493 aa35.14■■■■□ 3.22
CD8B-203ENST00000390655 CFTRP13569 1480 aa35.03■■■■□ 3.2
CD8B-203ENST00000390655 PDS5BQ9NTI5 1447 aa35.02■■■■□ 3.2
CD8B-203ENST00000390655 KIF21AQ7Z4S6 1674 aa34.97■■■■□ 3.19
CD8B-203ENST00000390655 PRDM2Q13029 1718 aa34.86■■■■□ 3.17
CD8B-203ENST00000390655 FANCD2Q9BXW9 1451 aa34.83■■■■□ 3.17
CD8B-203ENST00000390655 CEP164Q9UPV0 1460 aa34.77■■■■□ 3.16
CD8B-203ENST00000390655 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
CD8B-203ENST00000390655 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
CD8B-203ENST00000390655 CUX2O14529 1486 aa34.62■■■■□ 3.13
CD8B-203ENST00000390655 WDR62O43379 1518 aa34.52■■■■□ 3.12
CD8B-203ENST00000390655 URB2Q14146 1524 aaKnown RBP34.46■■■■□ 3.11
CD8B-203ENST00000390655 TOPBP1Q92547 1522 aa34.29■■■■□ 3.08
CD8B-203ENST00000390655 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
CD8B-203ENST00000390655 DNMBPQ6XZF7 1577 aa34.27■■■■□ 3.08
CD8B-203ENST00000390655 CUX1P39880 1505 aa34.12■■■■□ 3.05
CD8B-203ENST00000390655 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.03
CD8B-203ENST00000390655 IFT140Q96RY7 1462 aa34.01■■■■□ 3.03
CD8B-203ENST00000390655 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
CD8B-203ENST00000390655 FGD5Q6ZNL6 1462 aa33.98■■■■□ 3.03
CD8B-203ENST00000390655 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
CD8B-203ENST00000390655 SOGA1O94964 1423 aa33.9■■■■□ 3.02
CD8B-203ENST00000390655 TARBP1Q13395 1621 aaKnown RBP33.89■■■■□ 3.02
CD8B-203ENST00000390655 BIVM-ERCC5R4GMW8 1640 aa33.89■■■■□ 3.02
CD8B-203ENST00000390655 RAD54L2Q9Y4B4 1467 aa33.89■■■■□ 3.02
CD8B-203ENST00000390655 TOP2BQ02880 1626 aa33.89■■■■□ 3.02
CD8B-203ENST00000390655 ZNF608Q9ULD9 1512 aaPredicted RBP33.86■■■■□ 3.01
CD8B-203ENST00000390655 EIF4G3O43432 1585 aaKnown RBP33.75■■■□□ 2.99
CD8B-203ENST00000390655 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.99
CD8B-203ENST00000390655 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
CD8B-203ENST00000390655 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
CD8B-203ENST00000390655 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
CD8B-203ENST00000390655 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
CD8B-203ENST00000390655 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
CD8B-203ENST00000390655 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
CD8B-203ENST00000390655 GRIN2BQ13224 1484 aa33.46■■■□□ 2.95
CD8B-203ENST00000390655 TRIM41Q8WV44 630 aa33.41■■■□□ 2.94
CD8B-203ENST00000390655 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
CD8B-203ENST00000390655 FBLN2P98095 1184 aa33.33■■■□□ 2.93
CD8B-203ENST00000390655 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
CD8B-203ENST00000390655 CHD1O14646 1710 aa33.32■■■□□ 2.92
CD8B-203ENST00000390655 DNAJC5Q9H3Z4 198 aa33.29■■■□□ 2.92
CD8B-203ENST00000390655 KIF27Q86VH2 1401 aa33.27■■■□□ 2.92
CD8B-203ENST00000390655 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
CD8B-203ENST00000390655 ERICH3Q5RHP9 1530 aa33.24■■■□□ 2.91
CD8B-203ENST00000390655 CHMP7Q8WUX9 453 aaPredicted RBP33.23■■■□□ 2.91
CD8B-203ENST00000390655 SYNJ2O15056 1496 aa33.2■■■□□ 2.91
CD8B-203ENST00000390655 ADAMTS12P58397 1594 aa33.17■■■□□ 2.9
CD8B-203ENST00000390655 CHIC1Q5VXU3 224 aa33.12■■■□□ 2.89
CD8B-203ENST00000390655 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
CD8B-203ENST00000390655 IGF1RP08069 1367 aa33.09■■■□□ 2.89
CD8B-203ENST00000390655 RUSC2Q8N2Y8 1516 aa33.06■■■□□ 2.88
CD8B-203ENST00000390655 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
CD8B-203ENST00000390655 CUL7Q14999 1698 aa33.01■■■□□ 2.88
CD8B-203ENST00000390655 CARMIL1Q5VZK9 1371 aa32.91■■■□□ 2.86
CD8B-203ENST00000390655 CLASP1Q7Z460 1538 aa32.88■■■□□ 2.85
CD8B-203ENST00000390655 CEP170Q5SW79 1584 aa32.87■■■□□ 2.85
CD8B-203ENST00000390655 NUP160Q12769 1436 aa32.84■■■□□ 2.85
CD8B-203ENST00000390655 FAM9AQ8IZU1 332 aaPredicted RBP32.77■■■□□ 2.84
CD8B-203ENST00000390655 EEA1Q15075 1411 aa32.76■■■□□ 2.83
CD8B-203ENST00000390655 RAPGEF2Q9Y4G8 1499 aa32.75■■■□□ 2.83
CD8B-203ENST00000390655 CSRNP3Q8WYN3 585 aa32.73■■■□□ 2.83
CD8B-203ENST00000390655 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
CD8B-203ENST00000390655 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
CD8B-203ENST00000390655 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms