RNA–Protein interactions for RNA: ENST00000354266.7

RHOT1-202, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best) BASIC

Gene RHOT1, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-202ENST00000354266 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
RHOT1-202ENST00000354266 SHROOM4Q9ULL8 1493 aa33.98■■■■□ 3.03
RHOT1-202ENST00000354266 SUPT5HO00267 1087 aaKnown RBP33.38■■■□□ 2.93
RHOT1-202ENST00000354266 DCAF8L2P0C7V8 631 aa33.32■■■□□ 2.92
RHOT1-202ENST00000354266 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
RHOT1-202ENST00000354266 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
RHOT1-202ENST00000354266 CHIC1Q5VXU3 224 aa31.94■■■□□ 2.7
RHOT1-202ENST00000354266 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
RHOT1-202ENST00000354266 PCGF6Q9BYE7 350 aa31.45■■■□□ 2.63
RHOT1-202ENST00000354266 LOC105371045A0A1W2PR82 267 aa31.43■■■□□ 2.62
RHOT1-202ENST00000354266 EHMT2Q96KQ7 1210 aa31.19■■■□□ 2.58
RHOT1-202ENST00000354266 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
RHOT1-202ENST00000354266 FAM9AQ8IZU1 332 aaPredicted RBP31.03■■■□□ 2.56
RHOT1-202ENST00000354266 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
RHOT1-202ENST00000354266 HRCP23327 699 aa31.01■■■□□ 2.55
RHOT1-202ENST00000354266 PPARGC1BQ86YN6 1023 aaKnown RBP30.92■■■□□ 2.54
RHOT1-202ENST00000354266 ABCC9O60706 1549 aa30.89■■■□□ 2.54
RHOT1-202ENST00000354266 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
RHOT1-202ENST00000354266 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
RHOT1-202ENST00000354266 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
RHOT1-202ENST00000354266 CECR2Q9BXF3 1484 aa30.41■■■□□ 2.46
RHOT1-202ENST00000354266 TRIM26Q12899 539 aaPredicted RBP30.38■■■□□ 2.45
RHOT1-202ENST00000354266 MROH2BQ7Z745 1585 aa30.15■■■□□ 2.42
RHOT1-202ENST00000354266 TTBK1Q5TCY1 1321 aaPredicted RBP30.1■■■□□ 2.41
RHOT1-202ENST00000354266 NACADO15069 1562 aa30.02■■■□□ 2.4
RHOT1-202ENST00000354266 WIZO95785 1651 aa29.98■■■□□ 2.39
RHOT1-202ENST00000354266 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
RHOT1-202ENST00000354266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.62■■■□□ 2.33
RHOT1-202ENST00000354266 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
RHOT1-202ENST00000354266 ZEB1P37275 1124 aaPredicted RBP29.52■■■□□ 2.32
RHOT1-202ENST00000354266 BAZ1AQ9NRL2 1556 aaPredicted RBP29.51■■■□□ 2.32
RHOT1-202ENST00000354266 UBTFP17480 764 aaKnown RBP29.49■■■□□ 2.31
RHOT1-202ENST00000354266 CCER1Q8TC90 406 aaPredicted RBP29.46■■■□□ 2.31
RHOT1-202ENST00000354266 RANGAP1P46060 587 aaPredicted RBP29.44■■■□□ 2.3
RHOT1-202ENST00000354266 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
RHOT1-202ENST00000354266 SOGA1O94964 1423 aa29.34■■■□□ 2.29
RHOT1-202ENST00000354266 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
RHOT1-202ENST00000354266 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
RHOT1-202ENST00000354266 RUSC2Q8N2Y8 1516 aa29.21■■■□□ 2.27
RHOT1-202ENST00000354266 CSRNP3Q8WYN3 585 aa29.19■■■□□ 2.26
RHOT1-202ENST00000354266 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
RHOT1-202ENST00000354266 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
RHOT1-202ENST00000354266 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
RHOT1-202ENST00000354266 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
RHOT1-202ENST00000354266 HNRNPUL2Q1KMD3 747 aaKnown RBP28.98■■■□□ 2.23
RHOT1-202ENST00000354266 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
RHOT1-202ENST00000354266 TNIKQ9UKE5 1360 aa28.86■■■□□ 2.21
RHOT1-202ENST00000354266 BICRAQ9NZM4 1560 aa28.85■■■□□ 2.21
RHOT1-202ENST00000354266 SCAF1Q9H7N4 1312 aaKnown RBP28.8■■■□□ 2.2
RHOT1-202ENST00000354266 APLP2Q06481 763 aa28.76■■■□□ 2.19
RHOT1-202ENST00000354266 DIEXFQ68CQ4 756 aaKnown RBP28.75■■■□□ 2.19
RHOT1-202ENST00000354266 GOLGA3Q08378 1498 aa28.72■■■□□ 2.19
RHOT1-202ENST00000354266 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.19
RHOT1-202ENST00000354266 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
RHOT1-202ENST00000354266 SYNJ1O43426 1573 aa28.64■■■□□ 2.18
RHOT1-202ENST00000354266 EEA1Q15075 1411 aa28.64■■■□□ 2.18
RHOT1-202ENST00000354266 CLIP1P30622 1438 aa28.6■■■□□ 2.17
RHOT1-202ENST00000354266 YTHDC1Q96MU7 727 aaKnown RBP28.59■■■□□ 2.17
RHOT1-202ENST00000354266 NEUROD1Q13562 356 aa28.54■■■□□ 2.16
RHOT1-202ENST00000354266 RAPGEF2Q9Y4G8 1499 aa28.52■■■□□ 2.16
RHOT1-202ENST00000354266 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
RHOT1-202ENST00000354266 ITGAEP38570 1179 aa28.41■■■□□ 2.14
RHOT1-202ENST00000354266 ACIN1Q9UKV3 1341 aaKnown RBP28.39■■■□□ 2.14
RHOT1-202ENST00000354266 ZNF316A6NFI3 1004 aaPredicted RBP28.37■■■□□ 2.13
RHOT1-202ENST00000354266 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
RHOT1-202ENST00000354266 GTF3C3Q9Y5Q9 886 aa28.32■■■□□ 2.12
RHOT1-202ENST00000354266 VPS8Q8N3P4 1428 aa28.29■■■□□ 2.12
RHOT1-202ENST00000354266 CENPBP07199 599 aaPredicted RBP28.27■■■□□ 2.12
RHOT1-202ENST00000354266 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
RHOT1-202ENST00000354266 ATP1B4Q9UN42 357 aaPredicted RBP28.2■■■□□ 2.11
RHOT1-202ENST00000354266 KIF21BO75037 1637 aa28.18■■■□□ 2.1
RHOT1-202ENST00000354266 MIER1Q8N108 512 aa28.18■■■□□ 2.1
RHOT1-202ENST00000354266 P3H3Q8IVL6 736 aa28.11■■■□□ 2.09
RHOT1-202ENST00000354266 TOP2BQ02880 1626 aa28.06■■■□□ 2.08
RHOT1-202ENST00000354266 CUX1P39880 1505 aa27.99■■■□□ 2.07
RHOT1-202ENST00000354266 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
RHOT1-202ENST00000354266 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
RHOT1-202ENST00000354266 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
RHOT1-202ENST00000354266 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
RHOT1-202ENST00000354266 CUX2O14529 1486 aa27.86■■■□□ 2.05
RHOT1-202ENST00000354266 FAM50AQ14320 339 aaKnown RBP27.84■■■□□ 2.05
RHOT1-202ENST00000354266 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
RHOT1-202ENST00000354266 DHX57Q6P158 1386 aaKnown RBP27.79■■■□□ 2.04
RHOT1-202ENST00000354266 CFTRP13569 1480 aa27.78■■■□□ 2.04
RHOT1-202ENST00000354266 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
RHOT1-202ENST00000354266 ARHGAP35Q9NRY4 1499 aa27.72■■■□□ 2.03
RHOT1-202ENST00000354266 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
RHOT1-202ENST00000354266 PELP1Q8IZL8 1130 aaKnown RBP27.71■■■□□ 2.03
RHOT1-202ENST00000354266 IGF1RP08069 1367 aa27.71■■■□□ 2.03
RHOT1-202ENST00000354266 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
RHOT1-202ENST00000354266 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
RHOT1-202ENST00000354266 CADPSQ9ULU8 1353 aa27.66■■■□□ 2.02
RHOT1-202ENST00000354266 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
RHOT1-202ENST00000354266 HIRIP3Q9BW71 556 aaPredicted RBP27.59■■■□□ 2.01
RHOT1-202ENST00000354266 SIN3AQ96ST3 1273 aa27.59■■■□□ 2.01
RHOT1-202ENST00000354266 RAB3GAP2Q9H2M9 1393 aa27.53■■■□□ 2
RHOT1-202ENST00000354266 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
RHOT1-202ENST00000354266 RRBP1Q9P2E9 1410 aaKnown RBP27.49■■□□□ 1.99
RHOT1-202ENST00000354266 FHOD3Q2V2M9 1422 aa27.47■■□□□ 1.99
RHOT1-202ENST00000354266 NESP48681 1621 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms