Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MACF1Q9UPN3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MACF1Q9UPN3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC11.09□□□□□ -0.63
MACF1Q9UPN3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC11.08□□□□□ -0.64
MACF1Q9UPN3 AC060814.1-201ENST00000554326 538 ntBASIC11.08□□□□□ -0.64
MACF1Q9UPN3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC11.08□□□□□ -0.64
MACF1Q9UPN3 AC129492.7-201ENST00000622992 756 ntBASIC11.07□□□□□ -0.64
MACF1Q9UPN3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MACF1Q9UPN3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MACF1Q9UPN3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MACF1Q9UPN3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC11.07□□□□□ -0.64
MACF1Q9UPN3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MACF1Q9UPN3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC11.06□□□□□ -0.64
MACF1Q9UPN3 AL139246.5-201ENST00000606645 996 ntBASIC11.05□□□□□ -0.64
MACF1Q9UPN3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 DUX4L18-201ENST00000553347 1267 ntBASIC11.05□□□□□ -0.64
MACF1Q9UPN3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MACF1Q9UPN3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.04□□□□□ -0.64
MACF1Q9UPN3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MACF1Q9UPN3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MACF1Q9UPN3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MACF1Q9UPN3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MACF1Q9UPN3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC11.03□□□□□ -0.64
MACF1Q9UPN3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MACF1Q9UPN3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MACF1Q9UPN3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC11.02□□□□□ -0.64
MACF1Q9UPN3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MACF1Q9UPN3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC11.02□□□□□ -0.65
MACF1Q9UPN3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MACF1Q9UPN3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
MACF1Q9UPN3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC11.01□□□□□ -0.65
MACF1Q9UPN3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC11.01□□□□□ -0.65
MACF1Q9UPN3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC11.01□□□□□ -0.65
MACF1Q9UPN3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MACF1Q9UPN3 AC005837.3-201ENST00000612163 286 ntBASIC11.01□□□□□ -0.65
MACF1Q9UPN3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MACF1Q9UPN3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC11□□□□□ -0.65
MACF1Q9UPN3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC11□□□□□ -0.65
MACF1Q9UPN3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC11□□□□□ -0.65
MACF1Q9UPN3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC11□□□□□ -0.65
MACF1Q9UPN3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC11□□□□□ -0.65
MACF1Q9UPN3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MACF1Q9UPN3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MACF1Q9UPN3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MACF1Q9UPN3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.99□□□□□ -0.65
MACF1Q9UPN3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC10.99□□□□□ -0.65
MACF1Q9UPN3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
MACF1Q9UPN3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 AC103834.1-201ENST00000520383 144 ntBASIC10.98□□□□□ -0.65
MACF1Q9UPN3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MACF1Q9UPN3 AC010980.1-201ENST00000587192 1142 ntBASIC10.97□□□□□ -0.65
MACF1Q9UPN3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC10.97□□□□□ -0.65
MACF1Q9UPN3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC10.97□□□□□ -0.65
MACF1Q9UPN3 AC092296.2-201ENST00000589470 999 ntBASIC10.97□□□□□ -0.65
MACF1Q9UPN3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MACF1Q9UPN3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
MACF1Q9UPN3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
MACF1Q9UPN3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC10.96□□□□□ -0.65
MACF1Q9UPN3 AL592293.1-201ENST00000502889 1188 ntBASIC10.96□□□□□ -0.65
MACF1Q9UPN3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MACF1Q9UPN3 ZNRF2P3-201ENST00000424200 374 ntBASIC10.96□□□□□ -0.66
MACF1Q9UPN3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MACF1Q9UPN3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MACF1Q9UPN3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MACF1Q9UPN3 BHLHE23-202ENST00000612929 1109 ntBASIC10.95□□□□□ -0.66
MACF1Q9UPN3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC10.95□□□□□ -0.66
MACF1Q9UPN3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC10.95□□□□□ -0.66
MACF1Q9UPN3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MACF1Q9UPN3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC10.94□□□□□ -0.66
MACF1Q9UPN3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MACF1Q9UPN3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC10.94□□□□□ -0.66
MACF1Q9UPN3 AC239859.2-201ENST00000444165 318 ntBASIC10.94□□□□□ -0.66
MACF1Q9UPN3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC10.93□□□□□ -0.66
MACF1Q9UPN3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
MACF1Q9UPN3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MACF1Q9UPN3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MACF1Q9UPN3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
MACF1Q9UPN3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms