Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD8Q9HCK8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD8Q9HCK8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.76■■□□□ 1.55
CHD8Q9HCK8 AC129492.7-201ENST00000622992 756 ntBASIC24.76■■□□□ 1.55
CHD8Q9HCK8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD8Q9HCK8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.75■■□□□ 1.55
CHD8Q9HCK8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD8Q9HCK8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD8Q9HCK8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.73■■□□□ 1.55
CHD8Q9HCK8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.73■■□□□ 1.55
CHD8Q9HCK8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHD8Q9HCK8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHD8Q9HCK8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
CHD8Q9HCK8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.73■■□□□ 1.55
CHD8Q9HCK8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD8Q9HCK8 AL356441.2-201ENST00000443009 864 ntBASIC24.72■■□□□ 1.55
CHD8Q9HCK8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHD8Q9HCK8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CHD8Q9HCK8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.71■■□□□ 1.55
CHD8Q9HCK8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHD8Q9HCK8 GUSBP5-201ENST00000418136 578 ntBASIC24.71■■□□□ 1.55
CHD8Q9HCK8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.71■■□□□ 1.55
CHD8Q9HCK8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
CHD8Q9HCK8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CHD8Q9HCK8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CHD8Q9HCK8 AC025884.2-201ENST00000553429 711 ntBASIC24.69■■□□□ 1.54
CHD8Q9HCK8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHD8Q9HCK8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.68■■□□□ 1.54
CHD8Q9HCK8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD8Q9HCK8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHD8Q9HCK8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD8Q9HCK8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD8Q9HCK8 DUX4L18-201ENST00000553347 1267 ntBASIC24.65■■□□□ 1.54
CHD8Q9HCK8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.65■■□□□ 1.54
CHD8Q9HCK8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.65■■□□□ 1.54
CHD8Q9HCK8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD8Q9HCK8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.64■■□□□ 1.54
CHD8Q9HCK8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.64■■□□□ 1.54
CHD8Q9HCK8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CHD8Q9HCK8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.64■■□□□ 1.53
CHD8Q9HCK8 KRT8P33-201ENST00000508125 1423 ntBASIC24.64■■□□□ 1.53
CHD8Q9HCK8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CHD8Q9HCK8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD8Q9HCK8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD8Q9HCK8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD8Q9HCK8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD8Q9HCK8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHD8Q9HCK8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHD8Q9HCK8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHD8Q9HCK8 LINC00273-201ENST00000539813 1452 ntBASIC24.61■■□□□ 1.53
CHD8Q9HCK8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD8Q9HCK8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD8Q9HCK8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD8Q9HCK8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.61■■□□□ 1.53
CHD8Q9HCK8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CHD8Q9HCK8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHD8Q9HCK8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.6■■□□□ 1.53
CHD8Q9HCK8 AC148477.6-201ENST00000623746 465 ntBASIC24.59■■□□□ 1.53
CHD8Q9HCK8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHD8Q9HCK8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
CHD8Q9HCK8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD8Q9HCK8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.58■■□□□ 1.53
CHD8Q9HCK8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CHD8Q9HCK8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.56■■□□□ 1.52
CHD8Q9HCK8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD8Q9HCK8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD8Q9HCK8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.55■■□□□ 1.52
CHD8Q9HCK8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CHD8Q9HCK8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.55■■□□□ 1.52
CHD8Q9HCK8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.55■■□□□ 1.52
CHD8Q9HCK8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD8Q9HCK8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.54■■□□□ 1.52
CHD8Q9HCK8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CHD8Q9HCK8 RP9P-202ENST00000450133 1212 ntBASIC24.53■■□□□ 1.52
CHD8Q9HCK8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD8Q9HCK8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CHD8Q9HCK8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD8Q9HCK8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
CHD8Q9HCK8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.52■■□□□ 1.52
CHD8Q9HCK8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD8Q9HCK8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD8Q9HCK8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD8Q9HCK8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD8Q9HCK8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.51■■□□□ 1.51
CHD8Q9HCK8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD8Q9HCK8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.5■■□□□ 1.51
CHD8Q9HCK8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD8Q9HCK8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHD8Q9HCK8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHD8Q9HCK8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CHD8Q9HCK8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.48■■□□□ 1.51
CHD8Q9HCK8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.47■■□□□ 1.51
CHD8Q9HCK8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms