Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SND1-IT1Q9HBX3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SND1-IT1Q9HBX3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17■□□□□ 0.31
SND1-IT1Q9HBX3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SND1-IT1Q9HBX3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17■□□□□ 0.31
SND1-IT1Q9HBX3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SND1-IT1Q9HBX3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SND1-IT1Q9HBX3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SND1-IT1Q9HBX3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SND1-IT1Q9HBX3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
SND1-IT1Q9HBX3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SND1-IT1Q9HBX3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SND1-IT1Q9HBX3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SND1-IT1Q9HBX3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 AC010864.1-201ENST00000609407 1511 ntBASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SND1-IT1Q9HBX3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SND1-IT1Q9HBX3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SND1-IT1Q9HBX3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SND1-IT1Q9HBX3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SND1-IT1Q9HBX3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SND1-IT1Q9HBX3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SND1-IT1Q9HBX3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.96■□□□□ 0.31
SND1-IT1Q9HBX3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.96■□□□□ 0.31
SND1-IT1Q9HBX3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
SND1-IT1Q9HBX3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SND1-IT1Q9HBX3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SND1-IT1Q9HBX3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.95■□□□□ 0.3
SND1-IT1Q9HBX3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.95■□□□□ 0.3
SND1-IT1Q9HBX3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.95■□□□□ 0.3
SND1-IT1Q9HBX3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.95■□□□□ 0.3
SND1-IT1Q9HBX3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SND1-IT1Q9HBX3 AL449106.1-201ENST00000608517 1980 ntBASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SND1-IT1Q9HBX3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 AL133380.1-201ENST00000506013 324 ntBASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SND1-IT1Q9HBX3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.91■□□□□ 0.3
SND1-IT1Q9HBX3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SND1-IT1Q9HBX3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SND1-IT1Q9HBX3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.9■□□□□ 0.3
SND1-IT1Q9HBX3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.9■□□□□ 0.3
SND1-IT1Q9HBX3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SND1-IT1Q9HBX3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SND1-IT1Q9HBX3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SND1-IT1Q9HBX3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.89■□□□□ 0.29
SND1-IT1Q9HBX3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SND1-IT1Q9HBX3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SND1-IT1Q9HBX3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SND1-IT1Q9HBX3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.88■□□□□ 0.29
SND1-IT1Q9HBX3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.87■□□□□ 0.29
SND1-IT1Q9HBX3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.87■□□□□ 0.29
SND1-IT1Q9HBX3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.87■□□□□ 0.29
SND1-IT1Q9HBX3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SND1-IT1Q9HBX3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SND1-IT1Q9HBX3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SND1-IT1Q9HBX3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SND1-IT1Q9HBX3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SND1-IT1Q9HBX3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms