Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL53Q96EL3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL53Q96EL3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL53Q96EL3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.26■□□□□ 0.67
MRPL53Q96EL3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL53Q96EL3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPL53Q96EL3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.25■□□□□ 0.67
MRPL53Q96EL3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPL53Q96EL3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.25■□□□□ 0.67
MRPL53Q96EL3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRPL53Q96EL3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MRPL53Q96EL3 LINC01003-201ENST00000564834 1764 ntBASIC19.24■□□□□ 0.67
MRPL53Q96EL3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPL53Q96EL3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.24■□□□□ 0.67
MRPL53Q96EL3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 MIR762-201ENST00000390236 83 ntBASIC19.23■□□□□ 0.67
MRPL53Q96EL3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.23■□□□□ 0.67
MRPL53Q96EL3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MRPL53Q96EL3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL53Q96EL3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MRPL53Q96EL3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRPL53Q96EL3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL53Q96EL3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.21■□□□□ 0.67
MRPL53Q96EL3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL53Q96EL3 AP002414.2-202ENST00000590929 1450 ntBASIC19.21■□□□□ 0.67
MRPL53Q96EL3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
MRPL53Q96EL3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MRPL53Q96EL3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.19■□□□□ 0.66
MRPL53Q96EL3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL53Q96EL3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL53Q96EL3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL53Q96EL3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
MRPL53Q96EL3 AC100797.4-201ENST00000631653 1827 ntBASIC19.18■□□□□ 0.66
MRPL53Q96EL3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL53Q96EL3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL53Q96EL3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.18■□□□□ 0.66
MRPL53Q96EL3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL53Q96EL3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.17■□□□□ 0.66
MRPL53Q96EL3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL53Q96EL3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL53Q96EL3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MRPL53Q96EL3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL53Q96EL3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL53Q96EL3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL53Q96EL3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL53Q96EL3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL53Q96EL3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.15■□□□□ 0.66
MRPL53Q96EL3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.15■□□□□ 0.66
MRPL53Q96EL3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MRPL53Q96EL3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MRPL53Q96EL3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MRPL53Q96EL3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
MRPL53Q96EL3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MRPL53Q96EL3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.14■□□□□ 0.65
MRPL53Q96EL3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.14■□□□□ 0.65
MRPL53Q96EL3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.14■□□□□ 0.65
MRPL53Q96EL3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MRPL53Q96EL3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.12■□□□□ 0.65
MRPL53Q96EL3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.11■□□□□ 0.65
MRPL53Q96EL3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
MRPL53Q96EL3 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.11■□□□□ 0.65
MRPL53Q96EL3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MRPL53Q96EL3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL53Q96EL3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.11■□□□□ 0.65
MRPL53Q96EL3 AC005559.1-201ENST00000589661 871 ntBASIC19.11■□□□□ 0.65
MRPL53Q96EL3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL53Q96EL3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL53Q96EL3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL53Q96EL3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
MRPL53Q96EL3 AC108673.1-201ENST00000510422 1159 ntBASIC19.1■□□□□ 0.65
MRPL53Q96EL3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL53Q96EL3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.09■□□□□ 0.65
MRPL53Q96EL3 AC135983.2-203ENST00000454486 1613 ntBASIC19.09■□□□□ 0.65
MRPL53Q96EL3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL53Q96EL3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MRPL53Q96EL3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MRPL53Q96EL3 AC018358.1-201ENST00000631079 1402 ntBASIC19.08■□□□□ 0.65
MRPL53Q96EL3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL53Q96EL3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.08■□□□□ 0.64
MRPL53Q96EL3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.08■□□□□ 0.64
MRPL53Q96EL3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.07■□□□□ 0.64
MRPL53Q96EL3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL53Q96EL3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL53Q96EL3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.06■□□□□ 0.64
MRPL53Q96EL3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL53Q96EL3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MRPL53Q96EL3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms