Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CCDC105Q8IYK2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CCDC105Q8IYK2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
CCDC105Q8IYK2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC105Q8IYK2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
CCDC105Q8IYK2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.44■■□□□ 1.98
CCDC105Q8IYK2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC105Q8IYK2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC105Q8IYK2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC105Q8IYK2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.43■■□□□ 1.98
CCDC105Q8IYK2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC105Q8IYK2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CCDC105Q8IYK2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
CCDC105Q8IYK2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CCDC105Q8IYK2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC105Q8IYK2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC105Q8IYK2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC105Q8IYK2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC105Q8IYK2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC105Q8IYK2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC105Q8IYK2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC105Q8IYK2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.4■■□□□ 1.98
CCDC105Q8IYK2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC105Q8IYK2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
CCDC105Q8IYK2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CCDC105Q8IYK2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC105Q8IYK2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CCDC105Q8IYK2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CCDC105Q8IYK2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC105Q8IYK2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.36■■□□□ 1.97
CCDC105Q8IYK2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC105Q8IYK2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC105Q8IYK2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC105Q8IYK2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC105Q8IYK2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC105Q8IYK2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.35■■□□□ 1.97
CCDC105Q8IYK2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.34■■□□□ 1.97
CCDC105Q8IYK2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC105Q8IYK2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC105Q8IYK2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC105Q8IYK2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC105Q8IYK2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CCDC105Q8IYK2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CCDC105Q8IYK2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC105Q8IYK2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC105Q8IYK2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC105Q8IYK2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC105Q8IYK2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC105Q8IYK2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC105Q8IYK2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC105Q8IYK2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC105Q8IYK2 RARRES2P2-201ENST00000394842 485 ntBASIC27.29■■□□□ 1.96
CCDC105Q8IYK2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC105Q8IYK2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC105Q8IYK2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 ABHD17AP5-201ENST00000580133 923 ntBASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CCDC105Q8IYK2 AC142086.6-201ENST00000621154 1765 ntBASIC27.27■■□□□ 1.96
CCDC105Q8IYK2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC105Q8IYK2 AL139393.2-201ENST00000608721 2025 ntBASIC27.26■■□□□ 1.95
CCDC105Q8IYK2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC105Q8IYK2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC105Q8IYK2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC105Q8IYK2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC105Q8IYK2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC105Q8IYK2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC105Q8IYK2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CCDC105Q8IYK2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L13-201ENST00000554103 1267 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L15-201ENST00000611059 1267 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L23-201ENST00000615195 1269 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L24-201ENST00000617576 1269 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L22-201ENST00000618238 1269 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L20-201ENST00000619712 1269 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L21-201ENST00000622058 1269 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L10-201ENST00000622460 1267 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 DUX4L25-201ENST00000624915 1269 ntBASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.23■■□□□ 1.95
CCDC105Q8IYK2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC105Q8IYK2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.22■■□□□ 1.95
CCDC105Q8IYK2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC105Q8IYK2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC105Q8IYK2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.21■■□□□ 1.95
CCDC105Q8IYK2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC105Q8IYK2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC105Q8IYK2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms