Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC34P49427 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC34P49427 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC34P49427 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC34P49427 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC34P49427 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC34P49427 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC34P49427 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC34P49427 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC34P49427 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC34P49427 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC34P49427 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC34P49427 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC34P49427 WASH5P-204ENST00000632292 975 ntBASIC20.14■□□□□ 0.81
CDC34P49427 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC34P49427 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC34P49427 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC34P49427 AL449106.1-201ENST00000608517 1980 ntBASIC20.14■□□□□ 0.81
CDC34P49427 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC34P49427 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC34P49427 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC34P49427 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC34P49427 LINC01003-201ENST00000564834 1764 ntBASIC20.12■□□□□ 0.81
CDC34P49427 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDC34P49427 AL031258.1-201ENST00000623562 325 ntBASIC20.11■□□□□ 0.81
CDC34P49427 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDC34P49427 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC34P49427 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDC34P49427 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC34P49427 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC34P49427 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC34P49427 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC34P49427 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.09■□□□□ 0.81
CDC34P49427 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC34P49427 AP004833.2-201ENST00000532228 1454 ntBASIC20.09■□□□□ 0.81
CDC34P49427 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDC34P49427 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC34P49427 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC34P49427 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDC34P49427 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDC34P49427 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC34P49427 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC34P49427 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC34P49427 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC34P49427 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.05■□□□□ 0.8
CDC34P49427 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.05■□□□□ 0.8
CDC34P49427 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC34P49427 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC34P49427 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC34P49427 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDC34P49427 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC34P49427 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC34P49427 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.02■□□□□ 0.8
CDC34P49427 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC34P49427 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC34P49427 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC34P49427 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC34P49427 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.01■□□□□ 0.79
CDC34P49427 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDC34P49427 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDC34P49427 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC34P49427 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDC34P49427 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDC34P49427 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20■□□□□ 0.79
CDC34P49427 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC34P49427 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CDC34P49427 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC34P49427 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC34P49427 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC34P49427 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC34P49427 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC34P49427 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC34P49427 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC34P49427 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CDC34P49427 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
CDC34P49427 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC34P49427 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC34P49427 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC34P49427 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC34P49427 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC34P49427 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC34P49427 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC34P49427 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC34P49427 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDC34P49427 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDC34P49427 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC34P49427 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDC34P49427 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC34P49427 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDC34P49427 AC091060.1-201ENST00000623524 1766 ntBASIC19.93■□□□□ 0.78
CDC34P49427 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.93■□□□□ 0.78
CDC34P49427 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC34P49427 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDC34P49427 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDC34P49427 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC34P49427 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDC34P49427 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC34P49427 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC34P49427 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC34P49427 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms