Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YRF1-7	YPL283C	5580 nt		7.32	□□□□□ -1.24
CAF16	P43569	BEM1	YBR200W	1656 nt		7.32	□□□□□ -1.24
CAF16	P43569	YHR140W	YHR140W	720 nt		7.32	□□□□□ -1.24
CAF16	P43569	TIF2	YJL138C	1188 nt		7.32	□□□□□ -1.24
CAF16	P43569	TIF1	YKR059W	1188 nt		7.32	□□□□□ -1.24
CAF16	P43569	YPR150W	YPR150W	522 nt		7.32	□□□□□ -1.24
CAF16	P43569	YMR265C	YMR265C	1386 nt		7.32	□□□□□ -1.24
CAF16	P43569	YPL222C-A	YPL222C-A	246 nt		7.31	□□□□□ -1.24
CAF16	P43569	EAF3	YPR023C	1206 nt		7.31	□□□□□ -1.24
CAF16	P43569	RRP46	YGR095C	672 nt		7.3	□□□□□ -1.24
CAF16	P43569	ATP10	YLR393W	840 nt		7.3	□□□□□ -1.24
CAF16	P43569	ERG13	YML126C	1476 nt		7.3	□□□□□ -1.24
CAF16	P43569	YDR401W	YDR401W	564 nt		7.29	□□□□□ -1.24
CAF16	P43569	RIB3	YDR487C	627 nt		7.29	□□□□□ -1.24
CAF16	P43569	OYE2	YHR179W	1203 nt		7.29	□□□□□ -1.24
CAF16	P43569	GPM1	YKL152C	744 nt		7.29	□□□□□ -1.24
CAF16	P43569	PRE2	YPR103W	864 nt		7.29	□□□□□ -1.24
CAF16	P43569	ICE2	YIL090W	1476 nt		7.29	□□□□□ -1.24
CAF16	P43569	ENP1	YBR247C	1452 nt		7.29	□□□□□ -1.24
CAF16	P43569	STF1	YDL130W-A	261 nt		7.28	□□□□□ -1.24
CAF16	P43569	RRP1	YDR087C	837 nt		7.28	□□□□□ -1.24
CAF16	P43569	YIR017W-A	YIR017W-A	600 nt		7.28	□□□□□ -1.24
CAF16	P43569	YJL107C	YJL107C	1164 nt		7.28	□□□□□ -1.24
CAF16	P43569	COA2	YPL189C-A	207 nt		7.28	□□□□□ -1.24
CAF16	P43569	SAM3	YPL274W	1764 nt		7.28	□□□□□ -1.24
CAF16	P43569	PRY1	YJL079C	900 nt		7.27	□□□□□ -1.25
CAF16	P43569	YIL108W	YIL108W	2091 nt		7.26	□□□□□ -1.25
CAF16	P43569	DPB2	YPR175W	2070 nt		7.26	□□□□□ -1.25
CAF16	P43569	CDS1	YBR029C	1374 nt		7.26	□□□□□ -1.25
CAF16	P43569	RBG2	YGR173W	1107 nt		7.26	□□□□□ -1.25
CAF16	P43569	SPE4	YLR146C	903 nt		7.26	□□□□□ -1.25
CAF16	P43569	TAF11	YML015C	1041 nt		7.26	□□□□□ -1.25
CAF16	P43569	LEA1	YPL213W	717 nt		7.26	□□□□□ -1.25
CAF16	P43569	RPT5	YOR117W	1305 nt		7.26	□□□□□ -1.25
CAF16	P43569	SUV3	YPL029W	2214 nt		7.25	□□□□□ -1.25
CAF16	P43569	GFA1	YKL104C	2154 nt		7.25	□□□□□ -1.25
CAF16	P43569	RSM23	YGL129C	1353 nt		7.25	□□□□□ -1.25
CAF16	P43569	CDC10	YCR002C	969 nt		7.25	□□□□□ -1.25
CAF16	P43569	CAB5	YDR196C	726 nt		7.25	□□□□□ -1.25
CAF16	P43569	RPN14	YGL004C	1254 nt		7.25	□□□□□ -1.25
CAF16	P43569	SEN2	YLR105C	1134 nt		7.25	□□□□□ -1.25
CAF16	P43569	HAP5	YOR358W	729 nt		7.25	□□□□□ -1.25
CAF16	P43569	GDA1	YEL042W	1557 nt		7.25	□□□□□ -1.25
CAF16	P43569	HAL5	YJL165C	2568 nt		7.24	□□□□□ -1.25
CAF16	P43569	TRP1	YDR007W	675 nt		7.24	□□□□□ -1.25
CAF16	P43569	PIC2	YER053C	903 nt		7.24	□□□□□ -1.25
CAF16	P43569	YLR437C-A	YLR437C-A	228 nt		7.24	□□□□□ -1.25
CAF16	P43569	YMR253C	YMR253C	1245 nt		7.24	□□□□□ -1.25
CAF16	P43569	NAT5	YOR253W	531 nt		7.24	□□□□□ -1.25
CAF16	P43569	ERR3	YMR323W	1314 nt		7.24	□□□□□ -1.25
CAF16	P43569	ERR1	YOR393W	1314 nt		7.24	□□□□□ -1.25
CAF16	P43569	ERR2	YPL281C	1314 nt		7.24	□□□□□ -1.25
CAF16	P43569	GET2	YER083C	858 nt		7.23	□□□□□ -1.25
CAF16	P43569	BMT5	YIL096C	1011 nt		7.23	□□□□□ -1.25
CAF16	P43569	ELO1	YJL196C	933 nt		7.23	□□□□□ -1.25
CAF16	P43569	YBL081W	YBL081W	1107 nt		7.23	□□□□□ -1.25
CAF16	P43569	ATO2	YNR002C	849 nt		7.23	□□□□□ -1.25
CAF16	P43569	YNR068C	YNR068C	819 nt		7.23	□□□□□ -1.25
CAF16	P43569	NUP57	YGR119C	1626 nt		7.23	□□□□□ -1.25
CAF16	P43569	ABP1	YCR088W	1779 nt		7.23	□□□□□ -1.25
CAF16	P43569	CCR4	YAL021C	2514 nt		7.22	□□□□□ -1.25
CAF16	P43569	MMS21	YEL019C	804 nt		7.22	□□□□□ -1.25
CAF16	P43569	ERP5	YHR110W	639 nt		7.22	□□□□□ -1.25
CAF16	P43569	SMM1	YNR015W	1155 nt		7.22	□□□□□ -1.25
CAF16	P43569	RRT8	YOL048C	1029 nt		7.22	□□□□□ -1.25
CAF16	P43569	YIL092W	YIL092W	1902 nt		7.21	□□□□□ -1.25
CAF16	P43569	DDI1	YER143W	1287 nt		7.21	□□□□□ -1.26
CAF16	P43569	ERG6	YML008C	1152 nt		7.21	□□□□□ -1.26
CAF16	P43569	YPL264C	YPL264C	1062 nt		7.21	□□□□□ -1.26
CAF16	P43569	TPS1	YBR126C	1488 nt		7.21	□□□□□ -1.26
CAF16	P43569	POX1	YGL205W	2247 nt		7.21	□□□□□ -1.26
CAF16	P43569	HXT9	YJL219W	1704 nt		7.21	□□□□□ -1.26
CAF16	P43569	SEM1	YDR363W-A	270 nt		7.2	□□□□□ -1.26
CAF16	P43569	BIM1	YER016W	1035 nt		7.2	□□□□□ -1.26
CAF16	P43569	GUT1	YHL032C	2130 nt		7.2	□□□□□ -1.26
CAF16	P43569	YNR048W	YNR048W	1182 nt		7.2	□□□□□ -1.26
CAF16	P43569	YNR064C	YNR064C	873 nt		7.2	□□□□□ -1.26
CAF16	P43569	YMC2	YBR104W	990 nt		7.2	□□□□□ -1.26
CAF16	P43569	THI3	YDL080C	1830 nt		7.2	□□□□□ -1.26
CAF16	P43569	YEL034C-A	YEL034C-A	603 nt		7.19	□□□□□ -1.26
CAF16	P43569	THP3	YPR045C	1413 nt		7.18	□□□□□ -1.26
CAF16	P43569	AQR1	YNL065W	1761 nt		7.18	□□□□□ -1.26
CAF16	P43569	YGL118C	YGL118C	438 nt		7.18	□□□□□ -1.26
CAF16	P43569	YER152C	YER152C	1332 nt		7.18	□□□□□ -1.26
CAF16	P43569	RBS1	YDL189W	1374 nt		7.18	□□□□□ -1.26
CAF16	P43569	MAS2	YHR024C	1449 nt		7.18	□□□□□ -1.26
CAF16	P43569	TMA23	YMR269W	636 nt		7.17	□□□□□ -1.26
CAF16	P43569	KEL3	YPL263C	1956 nt		7.17	□□□□□ -1.26
CAF16	P43569	MRPL24	YMR193W	777 nt		7.16	□□□□□ -1.26
CAF16	P43569	ARO10	YDR380W	1908 nt		7.16	□□□□□ -1.26
CAF16	P43569	APM4	YOL062C	1476 nt		7.16	□□□□□ -1.26
CAF16	P43569	ARP10	YDR106W	855 nt		7.15	□□□□□ -1.26
CAF16	P43569	HST2	YPL015C	1074 nt		7.15	□□□□□ -1.26
CAF16	P43569	SAM50	YNL026W	1455 nt		7.15	□□□□□ -1.27
CAF16	P43569	snR86	snR86	1004 nt		7.14	□□□□□ -1.27
CAF16	P43569	IMO32	YGR031W	1029 nt		7.14	□□□□□ -1.27
CAF16	P43569	WSC4	YHL028W	1818 nt		7.14	□□□□□ -1.27
CAF16	P43569	CRC1	YOR100C	984 nt		7.14	□□□□□ -1.27
CAF16	P43569	AIM41	YOR215C	558 nt		7.14	□□□□□ -1.27
CAF16	P43569	YJR114W	YJR114W	393 nt		7.13	□□□□□ -1.27

Retrieved 100 of 7,029 protein–RNA pairs in 28 ms