RNA–Protein interactions for RNA: YGL129C

RSM23, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM23, Length 1,353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM23YGL129C MTC1P47018 478 aaKnown RBP19.83■□□□□ 0.76
RSM23YGL129C DRS1P32892 752 aaKnown RBP19.52■□□□□ 0.72
RSM23YGL129C DIP2Q12220 943 aaPredicted RBP16.74■□□□□ 0.27
RSM23YGL129C BFR2Q06631 534 aaKnown RBP16.7■□□□□ 0.26
RSM23YGL129C FAP1P53971 965 aa16.6■□□□□ 0.25
RSM23YGL129C AVT3P36062 692 aa16.49■□□□□ 0.23
RSM23YGL129C PRI1P10363 409 aa16.14■□□□□ 0.17
RSM23YGL129C ISW2Q08773 1120 aa16.12■□□□□ 0.17
RSM23YGL129C RPG1P38249 964 aaKnown RBP15.99■□□□□ 0.15
RSM23YGL129C AAD16Q02895 342 aa15.86■□□□□ 0.13
RSM23YGL129C RSE1Q04693 1361 aaKnown RBP15.86■□□□□ 0.13
RSM23YGL129C PRY3P47033 881 aa15.59■□□□□ 0.09
RSM23YGL129C TFA1P36100 482 aa15.49■□□□□ 0.07
RSM23YGL129C RPL17AP05740 184 aaKnown RBP15.33■□□□□ 0.04
RSM23YGL129C RPL17BP46990 184 aaKnown RBP15.33■□□□□ 0.04
RSM23YGL129C TSR3Q12094 313 aaKnown RBP15.32■□□□□ 0.04
RSM23YGL129C REB1P21538 810 aa15.1■□□□□ 0.01
RSM23YGL129C YCK3P39962 524 aa14.97□□□□□ -0.01
RSM23YGL129C SPT21P35209 758 aa14.84□□□□□ -0.03
RSM23YGL129C HAA1Q12753 694 aaKnown RBP14.63□□□□□ -0.07
RSM23YGL129C MRPL32P25348 183 aa14.61□□□□□ -0.07
RSM23YGL129C RIM101P33400 625 aa14.49□□□□□ -0.09
RSM23YGL129C YKR023WP36119 530 aaKnown RBP14.43□□□□□ -0.1
RSM23YGL129C CDC27P38042 758 aa14.22□□□□□ -0.13
RSM23YGL129C HOP09932 586 aa14.1□□□□□ -0.15
RSM23YGL129C TFC8Q12308 588 aa14.09□□□□□ -0.15
RSM23YGL129C OXP1P28273 1286 aa14.09□□□□□ -0.15
RSM23YGL129C DCD1P06773 312 aa14.06□□□□□ -0.16
RSM23YGL129C YAH1Q12184 172 aaKnown RBP13.74□□□□□ -0.21
RSM23YGL129C PTP3P40048 928 aa13.73□□□□□ -0.21
RSM23YGL129C YIL055CP40523 627 aaKnown RBP13.71□□□□□ -0.21
RSM23YGL129C YGL015CP33199 130 aa13.71□□□□□ -0.22
RSM23YGL129C BCH2P36122 765 aa13.68□□□□□ -0.22
RSM23YGL129C SSP1P38871 571 aa13.63□□□□□ -0.23
RSM23YGL129C MAP2P38174 421 aaKnown RBP13.62□□□□□ -0.23
RSM23YGL129C YLR271WQ06152 274 aa13.6□□□□□ -0.23
RSM23YGL129C RSM7P47150 247 aa13.58□□□□□ -0.24
RSM23YGL129C UBP10P53874 792 aaPredicted RBP13.57□□□□□ -0.24
RSM23YGL129C SCY1P53009 804 aa13.51□□□□□ -0.25
RSM23YGL129C EPS1P40557 701 aa13.4□□□□□ -0.26
RSM23YGL129C AI2P03876 854 aa13.39□□□□□ -0.27
RSM23YGL129C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.36□□□□□ -0.27not detected
RSM23YGL129C BDF1P35817 686 aa13.32□□□□□ -0.28
RSM23YGL129C PSD2P53037 1138 aaKnown RBP13.29□□□□□ -0.28
RSM23YGL129C BBC1P47068 1157 aa13.24□□□□□ -0.29
RSM23YGL129C SLX5P32828 619 aaKnown RBP13.22□□□□□ -0.29
RSM23YGL129C CST9Q06032 482 aa13.2□□□□□ -0.3
RSM23YGL129C MGA2P40578 1113 aa13.18□□□□□ -0.3
RSM23YGL129C MRM1P25270 412 aa12.97□□□□□ -0.33
RSM23YGL129C TIF4632P39936 914 aaKnown RBP12.93□□□□□ -0.34
RSM23YGL129C TGL3P40308 642 aa12.9□□□□□ -0.34
RSM23YGL129C RCR1P38212 213 aa12.81□□□□□ -0.36
RSM23YGL129C RTG3P38165 486 aa12.7□□□□□ -0.38
RSM23YGL129C VPS29P38759 282 aa12.69□□□□□ -0.38
RSM23YGL129C NSR1P27476 414 aaKnown RBP RIP-Chip data12.69□□□□□ -0.38not detected
RSM23YGL129C RAM2P29703 316 aa12.66□□□□□ -0.38
RSM23YGL129C DMA1P38823 416 aa12.61□□□□□ -0.39
RSM23YGL129C YAP5P40574 245 aa12.57□□□□□ -0.4
RSM23YGL129C STS1P38637 319 aa12.55□□□□□ -0.4
RSM23YGL129C MST1P07236 462 aa12.54□□□□□ -0.4
RSM23YGL129C YMR1P47147 688 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
RSM23YGL129C YOR238WQ08634 303 aa12.54□□□□□ -0.4
RSM23YGL129C PIB1Q06651 286 aa12.5□□□□□ -0.41
RSM23YGL129C YFR006WP43590 535 aa12.49□□□□□ -0.41
RSM23YGL129C DBP1P24784 617 aaKnown RBP12.48□□□□□ -0.41
RSM23YGL129C RQC2Q12532 1038 aaKnown RBP12.45□□□□□ -0.42
RSM23YGL129C MAK11P20484 414 aaKnown RBP12.43□□□□□ -0.42
RSM23YGL129C VMA1P17255 1071 aaKnown RBP12.3□□□□□ -0.44
RSM23YGL129C EDS1P38073 919 aa12.29□□□□□ -0.44
RSM23YGL129C COQ8P27697 501 aa12.27□□□□□ -0.45
RSM23YGL129C SET1P38827 1080 aaKnown RBP12.22□□□□□ -0.45
RSM23YGL129C MIF2P35201 549 aa12.21□□□□□ -0.45
RSM23YGL129C GTT3P39996 337 aa12.21□□□□□ -0.45
RSM23YGL129C YBL029C-AQ3E756 94 aa12.19□□□□□ -0.46
RSM23YGL129C BUD31P25337 157 aaPredicted RBP12.18□□□□□ -0.46
RSM23YGL129C SAM3Q08986 587 aa12.18□□□□□ -0.46
RSM23YGL129C WSC3Q12215 556 aa12.15□□□□□ -0.46
RSM23YGL129C PTC3P34221 468 aaKnown RBP12.13□□□□□ -0.47
RSM23YGL129C UBP9P39967 754 aa12.11□□□□□ -0.47
RSM23YGL129C YOL036WQ08206 761 aa12.11□□□□□ -0.47
RSM23YGL129C VNX1P42839 908 aa12.09□□□□□ -0.47
RSM23YGL129C SAS10Q12136 610 aaPredicted RBP12.07□□□□□ -0.48
RSM23YGL129C SET4P42948 560 aa12.05□□□□□ -0.48
RSM23YGL129C NOP53Q12080 455 aaKnown RBP12.05□□□□□ -0.48
RSM23YGL129C YPR148CQ06523 435 aa12.03□□□□□ -0.48
RSM23YGL129C GYP5Q12344 894 aa12.01□□□□□ -0.49
RSM23YGL129C MSB4Q12317 492 aa11.99□□□□□ -0.49
RSM23YGL129C GRE2Q12068 342 aaKnown RBP11.98□□□□□ -0.49
RSM23YGL129C TIF11P38912 153 aaKnown RBP11.93□□□□□ -0.5
RSM23YGL129C SPP1Q03012 353 aa11.93□□□□□ -0.5
RSM23YGL129C GUT1P32190 709 aa11.92□□□□□ -0.5
RSM23YGL129C ATH1P48016 1211 aa11.92□□□□□ -0.5
RSM23YGL129C DCW1P36091 449 aa11.92□□□□□ -0.5
RSM23YGL129C VPS70P47161 811 aa11.92□□□□□ -0.5
RSM23YGL129C IFH1P39520 1085 aa11.91□□□□□ -0.5
RSM23YGL129C SOL3P38858 249 aa11.89□□□□□ -0.51
RSM23YGL129C TRP5P00931 707 aaKnown RBP11.87□□□□□ -0.51
RSM23YGL129C NST1P53935 1240 aa11.87□□□□□ -0.51
RSM23YGL129C IOC2Q12072 812 aa11.87□□□□□ -0.51
RSM23YGL129C ABP1P15891 592 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms