Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.96■■□□□ 1.11
CDKN1AP38936 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN1AP38936 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKN1AP38936 RARRES2P2-201ENST00000394842 485 ntBASIC21.96■■□□□ 1.11
CDKN1AP38936 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKN1AP38936 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.96■■□□□ 1.11
CDKN1AP38936 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDKN1AP38936 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CDKN1AP38936 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.95■■□□□ 1.1
CDKN1AP38936 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN1AP38936 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDKN1AP38936 WHAMMP2-203ENST00000563942 1603 ntBASIC21.94■■□□□ 1.1
CDKN1AP38936 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.93■■□□□ 1.1
CDKN1AP38936 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.93■■□□□ 1.1
CDKN1AP38936 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN1AP38936 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN1AP38936 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDKN1AP38936 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN1AP38936 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDKN1AP38936 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDKN1AP38936 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN1AP38936 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDKN1AP38936 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN1AP38936 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
CDKN1AP38936 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CDKN1AP38936 AL135925.1-201ENST00000605920 1701 ntBASIC21.91■■□□□ 1.1
CDKN1AP38936 AC135983.2-203ENST00000454486 1613 ntBASIC21.91■■□□□ 1.1
CDKN1AP38936 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN1AP38936 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN1AP38936 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKN1AP38936 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN1AP38936 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDKN1AP38936 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN1AP38936 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.88■■□□□ 1.09
CDKN1AP38936 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN1AP38936 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN1AP38936 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN1AP38936 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKN1AP38936 ABHD17AP5-201ENST00000580133 923 ntBASIC21.87■■□□□ 1.09
CDKN1AP38936 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN1AP38936 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKN1AP38936 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CDKN1AP38936 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDKN1AP38936 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.85■■□□□ 1.09
CDKN1AP38936 RNF126P1-201ENST00000567452 1320 ntBASIC21.85■■□□□ 1.09
CDKN1AP38936 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDKN1AP38936 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CDKN1AP38936 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN1AP38936 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.85■■□□□ 1.09
CDKN1AP38936 AC008813.1-201ENST00000536597 885 ntBASIC21.85■■□□□ 1.09
CDKN1AP38936 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.85■■□□□ 1.09
CDKN1AP38936 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
CDKN1AP38936 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDKN1AP38936 AC022413.1-201ENST00000624602 984 ntBASIC21.85■■□□□ 1.09
CDKN1AP38936 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN1AP38936 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN1AP38936 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN1AP38936 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN1AP38936 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN1AP38936 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN1AP38936 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN1AP38936 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN1AP38936 AC110285.7-201ENST00000624417 1536 ntBASIC21.82■■□□□ 1.08
CDKN1AP38936 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CDKN1AP38936 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN1AP38936 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.81■■□□□ 1.08
CDKN1AP38936 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN1AP38936 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN1AP38936 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN1AP38936 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN1AP38936 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDKN1AP38936 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CDKN1AP38936 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDKN1AP38936 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKN1AP38936 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDKN1AP38936 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDKN1AP38936 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN1AP38936 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.77■■□□□ 1.08
CDKN1AP38936 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN1AP38936 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.76■■□□□ 1.07
CDKN1AP38936 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN1AP38936 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDKN1AP38936 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN1AP38936 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.76■■□□□ 1.07
CDKN1AP38936 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN1AP38936 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN1AP38936 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN1AP38936 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN1AP38936 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.74■■□□□ 1.07
CDKN1AP38936 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN1AP38936 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CDKN1AP38936 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN1AP38936 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN1AP38936 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CDKN1AP38936 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CDKN1AP38936 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
CDKN1AP38936 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN1AP38936 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CDKN1AP38936 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN1AP38936 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms