Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM3O75382 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TRIM3O75382 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM3O75382 LINC00273-201ENST00000539813 1452 ntBASIC23.68■■□□□ 1.38
TRIM3O75382 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRIM3O75382 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM3O75382 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM3O75382 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TRIM3O75382 DUX4L11-201ENST00000611504 1267 ntBASIC23.66■■□□□ 1.38
TRIM3O75382 DUX4L12-201ENST00000614593 1267 ntBASIC23.66■■□□□ 1.38
TRIM3O75382 DUX4L14-201ENST00000621227 1267 ntBASIC23.66■■□□□ 1.38
TRIM3O75382 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM3O75382 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM3O75382 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM3O75382 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM3O75382 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.38
TRIM3O75382 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM3O75382 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM3O75382 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
TRIM3O75382 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM3O75382 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM3O75382 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.64■■□□□ 1.38
TRIM3O75382 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.37
TRIM3O75382 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM3O75382 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM3O75382 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM3O75382 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM3O75382 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM3O75382 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM3O75382 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM3O75382 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRIM3O75382 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM3O75382 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM3O75382 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM3O75382 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM3O75382 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM3O75382 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TRIM3O75382 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM3O75382 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM3O75382 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM3O75382 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM3O75382 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM3O75382 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM3O75382 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM3O75382 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM3O75382 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRIM3O75382 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TRIM3O75382 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.58■■□□□ 1.37
TRIM3O75382 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.58■■□□□ 1.37
TRIM3O75382 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM3O75382 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM3O75382 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM3O75382 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM3O75382 MIR3648-2-201ENST00000581792 180 ntBASIC23.56■■□□□ 1.36
TRIM3O75382 MIR3648-1-201ENST00000615959 180 ntBASIC23.56■■□□□ 1.36
TRIM3O75382 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TRIM3O75382 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM3O75382 HLA-V-202ENST00000446817 847 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L13-201ENST00000554103 1267 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L15-201ENST00000611059 1267 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L23-201ENST00000615195 1269 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L24-201ENST00000617576 1269 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L22-201ENST00000618238 1269 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L20-201ENST00000619712 1269 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L21-201ENST00000622058 1269 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L10-201ENST00000622460 1267 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 DUX4L25-201ENST00000624915 1269 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.55■■□□□ 1.36
TRIM3O75382 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM3O75382 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM3O75382 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM3O75382 AC135983.2-203ENST00000454486 1613 ntBASIC23.55■■□□□ 1.36
TRIM3O75382 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
TRIM3O75382 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM3O75382 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM3O75382 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM3O75382 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM3O75382 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM3O75382 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM3O75382 CR559946.2-201ENST00000623684 991 ntBASIC23.54■■□□□ 1.36
TRIM3O75382 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM3O75382 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM3O75382 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM3O75382 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.53■■□□□ 1.36
TRIM3O75382 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.53■■□□□ 1.36
TRIM3O75382 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM3O75382 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM3O75382 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TRIM3O75382 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM3O75382 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM3O75382 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM3O75382 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM3O75382 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TRIM3O75382 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM3O75382 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM3O75382 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRIM3O75382 AC016575.1-201ENST00000607026 382 ntBASIC23.51■■□□□ 1.35
TRIM3O75382 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TRIM3O75382 WHAMMP2-203ENST00000563942 1603 ntBASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms