Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.16■■■□□ 2.26
TNRC18O15417 AC129492.7-201ENST00000622992 756 ntBASIC29.16■■■□□ 2.26
TNRC18O15417 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
TNRC18O15417 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
TNRC18O15417 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
TNRC18O15417 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.16■■■□□ 2.26
TNRC18O15417 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
TNRC18O15417 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
TNRC18O15417 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.15■■■□□ 2.26
TNRC18O15417 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC29.14■■■□□ 2.26
TNRC18O15417 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.14■■■□□ 2.26
TNRC18O15417 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.14■■■□□ 2.26
TNRC18O15417 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
TNRC18O15417 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
TNRC18O15417 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.13■■■□□ 2.25
TNRC18O15417 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.13■■■□□ 2.25
TNRC18O15417 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.13■■■□□ 2.25
TNRC18O15417 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.13■■■□□ 2.25
TNRC18O15417 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC18O15417 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC18O15417 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC18O15417 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC18O15417 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC18O15417 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC18O15417 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
TNRC18O15417 AL356441.2-201ENST00000443009 864 ntBASIC29.11■■■□□ 2.25
TNRC18O15417 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.11■■■□□ 2.25
TNRC18O15417 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TNRC18O15417 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TNRC18O15417 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TNRC18O15417 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TNRC18O15417 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
TNRC18O15417 MIR638-201ENST00000385237 100 ntBASIC29.09■■■□□ 2.25
TNRC18O15417 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
TNRC18O15417 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
TNRC18O15417 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.08■■■□□ 2.25
TNRC18O15417 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.08■■■□□ 2.25
TNRC18O15417 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
TNRC18O15417 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
TNRC18O15417 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
TNRC18O15417 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.07■■■□□ 2.24
TNRC18O15417 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
TNRC18O15417 DUX4L18-201ENST00000553347 1267 ntBASIC29.06■■■□□ 2.24
TNRC18O15417 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
TNRC18O15417 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
TNRC18O15417 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
TNRC18O15417 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.04■■■□□ 2.24
TNRC18O15417 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
TNRC18O15417 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
TNRC18O15417 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.02■■■□□ 2.24
TNRC18O15417 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
TNRC18O15417 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
TNRC18O15417 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.01■■■□□ 2.24
TNRC18O15417 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.01■■■□□ 2.23
TNRC18O15417 KRT8P33-201ENST00000508125 1423 ntBASIC29.01■■■□□ 2.23
TNRC18O15417 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
TNRC18O15417 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
TNRC18O15417 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.98■■■□□ 2.23
TNRC18O15417 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
TNRC18O15417 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
TNRC18O15417 AC008406.3-201ENST00000620001 1374 ntBASIC28.97■■■□□ 2.23
TNRC18O15417 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
TNRC18O15417 AC092666.2-201ENST00000613287 246 ntBASIC28.97■■■□□ 2.23
TNRC18O15417 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TNRC18O15417 LINC00273-201ENST00000539813 1452 ntBASIC28.95■■■□□ 2.23
TNRC18O15417 RP9P-202ENST00000450133 1212 ntBASIC28.95■■■□□ 2.22
TNRC18O15417 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.95■■■□□ 2.22
TNRC18O15417 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
TNRC18O15417 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.94■■■□□ 2.22
TNRC18O15417 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
TNRC18O15417 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
TNRC18O15417 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.92■■■□□ 2.22
TNRC18O15417 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TNRC18O15417 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TNRC18O15417 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TNRC18O15417 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.21
TNRC18O15417 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TNRC18O15417 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
TNRC18O15417 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TNRC18O15417 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.88■■■□□ 2.21
TNRC18O15417 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.88■■■□□ 2.21
TNRC18O15417 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.86■■■□□ 2.21
TNRC18O15417 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.86■■■□□ 2.21
TNRC18O15417 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
TNRC18O15417 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
TNRC18O15417 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.86■■■□□ 2.21
TNRC18O15417 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TNRC18O15417 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TNRC18O15417 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.85■■■□□ 2.21
TNRC18O15417 SPCS2P3-201ENST00000500401 656 ntBASIC28.85■■■□□ 2.21
TNRC18O15417 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.85■■■□□ 2.21
TNRC18O15417 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.84■■■□□ 2.21
TNRC18O15417 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.83■■■□□ 2.21
TNRC18O15417 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
TNRC18O15417 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TNRC18O15417 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TNRC18O15417 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
TNRC18O15417 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TNRC18O15417 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.81■■■□□ 2.2
TNRC18O15417 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms