Protein–RNA interactions for Protein: A6NNH2

FAM90A27P, Protein FAM90A27P, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A27PA6NNH2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FAM90A27PA6NNH2 WHAMMP2-203ENST00000563942 1603 ntBASIC22.74■■□□□ 1.23
FAM90A27PA6NNH2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A27PA6NNH2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A27PA6NNH2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A27PA6NNH2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM90A27PA6NNH2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.72■■□□□ 1.23
FAM90A27PA6NNH2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.72■■□□□ 1.23
FAM90A27PA6NNH2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
FAM90A27PA6NNH2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
FAM90A27PA6NNH2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM90A27PA6NNH2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
FAM90A27PA6NNH2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM90A27PA6NNH2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.69■■□□□ 1.22
FAM90A27PA6NNH2 AC135983.2-203ENST00000454486 1613 ntBASIC22.69■■□□□ 1.22
FAM90A27PA6NNH2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM90A27PA6NNH2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM90A27PA6NNH2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.68■■□□□ 1.22
FAM90A27PA6NNH2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FAM90A27PA6NNH2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A27PA6NNH2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
FAM90A27PA6NNH2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.67■■□□□ 1.22
FAM90A27PA6NNH2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A27PA6NNH2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.66■■□□□ 1.22
FAM90A27PA6NNH2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM90A27PA6NNH2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM90A27PA6NNH2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.66■■□□□ 1.22
FAM90A27PA6NNH2 NTF6A-201ENST00000591175 560 ntBASIC22.66■■□□□ 1.22
FAM90A27PA6NNH2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A27PA6NNH2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A27PA6NNH2 AC110285.7-201ENST00000624417 1536 ntBASIC22.65■■□□□ 1.22
FAM90A27PA6NNH2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FAM90A27PA6NNH2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.64■■□□□ 1.21
FAM90A27PA6NNH2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
FAM90A27PA6NNH2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FAM90A27PA6NNH2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.63■■□□□ 1.21
FAM90A27PA6NNH2 AC012354.3-201ENST00000623734 483 ntBASIC22.63■■□□□ 1.21
FAM90A27PA6NNH2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.63■■□□□ 1.21
FAM90A27PA6NNH2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FAM90A27PA6NNH2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FAM90A27PA6NNH2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
FAM90A27PA6NNH2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
FAM90A27PA6NNH2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
FAM90A27PA6NNH2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
FAM90A27PA6NNH2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.61■■□□□ 1.21
FAM90A27PA6NNH2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FAM90A27PA6NNH2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.61■■□□□ 1.21
FAM90A27PA6NNH2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
FAM90A27PA6NNH2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FAM90A27PA6NNH2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FAM90A27PA6NNH2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
FAM90A27PA6NNH2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
FAM90A27PA6NNH2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.58■■□□□ 1.21
FAM90A27PA6NNH2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FAM90A27PA6NNH2 AL135925.1-201ENST00000605920 1701 ntBASIC22.57■■□□□ 1.2
FAM90A27PA6NNH2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A27PA6NNH2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A27PA6NNH2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
FAM90A27PA6NNH2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.56■■□□□ 1.2
FAM90A27PA6NNH2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A27PA6NNH2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A27PA6NNH2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A27PA6NNH2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.55■■□□□ 1.2
FAM90A27PA6NNH2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
FAM90A27PA6NNH2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
FAM90A27PA6NNH2 AC060814.1-201ENST00000554326 538 ntBASIC22.54■■□□□ 1.2
FAM90A27PA6NNH2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM90A27PA6NNH2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM90A27PA6NNH2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM90A27PA6NNH2 AC148477.6-201ENST00000623746 465 ntBASIC22.53■■□□□ 1.2
FAM90A27PA6NNH2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM90A27PA6NNH2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM90A27PA6NNH2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
FAM90A27PA6NNH2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.51■■□□□ 1.19
FAM90A27PA6NNH2 AL033527.3-201ENST00000566366 1196 ntBASIC22.51■■□□□ 1.19
FAM90A27PA6NNH2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM90A27PA6NNH2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM90A27PA6NNH2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM90A27PA6NNH2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.5■■□□□ 1.19
FAM90A27PA6NNH2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FAM90A27PA6NNH2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
FAM90A27PA6NNH2 MIR219A2-201ENST00000608502 1504 ntBASIC22.5■■□□□ 1.19
FAM90A27PA6NNH2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM90A27PA6NNH2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A27PA6NNH2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A27PA6NNH2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
FAM90A27PA6NNH2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A27PA6NNH2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
FAM90A27PA6NNH2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A27PA6NNH2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM90A27PA6NNH2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM90A27PA6NNH2 U85056.1-201ENST00000616429 682 ntBASIC22.48■■□□□ 1.19
FAM90A27PA6NNH2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
FAM90A27PA6NNH2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM90A27PA6NNH2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.47■■□□□ 1.19
FAM90A27PA6NNH2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM90A27PA6NNH2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM90A27PA6NNH2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM90A27PA6NNH2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
FAM90A27PA6NNH2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms